Gene
Gene Model ID | pfu_aug2.0_1334.1_14969 |
---|---|
Locus | scaffold1334.1 : 54317 ... 66825 : - |
To GenomeBrowser | scaffold1334.1:54317..66825 |
Genes list of scaffold | scaffold1334.1 |
Synonym | pfu_aug1.0_9091.1_67981 |
Manual annotation
Hmmer Search for Pfam
query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
---|---|---|---|---|---|---|---|---|---|---|
pfu_aug2.0_1334.1_14969.t1 | 1 | 1 | Xan_ur_permease | 96 | 514 | 0.0 | 263.9 | 0.0 | 0.0 | 263.5 |
Blast Hit to nr / sp
query | Subject ID | Subject Name | evalue |
---|---|---|---|
pfu_aug2.0_1334.1_14969.t1 | gi|585719693|ref|XP_006826111.1| | PREDICTED: LOW QUALITY PROTEIN: solute carrier family 23 member 2 [Saccoglossus kowalevskii] | 0.0 |
pfu_aug2.0_1334.1_14969.t1 | gi|568941891|ref|XP_006506197.1| | PREDICTED: uncharacterized protein LOC243753 isoform X1 [Mus musculus] | 0.0 |
Transcript
Transcript ID | pfu_aug2.0_1334.1_14969.t1 |
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Definition | - |
>pfu_aug2.0_1334.1_14969.t1 atgagccccgtccggtcaggtcagtttgctacgacaatactacaaggaagatggcagtatcatattttagagaaaaccgg gaaaacagggtgctctggatttagtgaacaggacagtaagcgatcaaaagttatgaaaattcctgaaattgtttcaggaa atatacaaatggaaattagtgaacaaaaaacgaccggaatgaaggaaaacaacgctaagtctagaaccaaaccggacaac agtaaaattatatatggtgtagaagacgtaccaccctaccatatgatattctttttcggtcttcagcaagccattatgtg tataggcgggactctctcccttccgtttctcttatcacaacttctatgcgcgggaaatcaagatgacgttagagcgaagc ttctcagtctgactttattcatgagcgggctagcaacggttgtacagtgtttccttggagtcagattaccaattatacaa ggaggctcccataccttcattcctccaatagtagccatgatgacgttagaccagttcagatgtcaaccgggagaaggtat tatgccagcgtcagaaaataccacatattctgaagacgattggatgttaaggatgagagaaatacagggtagtattatcc tggcttcgatcacacaggttttggtagggacgttaggattggctggatttcttcttaaatttattggaccactgacgata gctcccgctatatcacttataggactctcattggttgaaattgtgtcagatttctgtgaacctcagtgggggatatcgtt agcaaccgtttgcctgataatcatcttctcctcagtactcaacaaagtgaatgttccaatcccagcatacaacaaacatc atggctgtcatatagcggcatttcctttattccaactacttccgattgcgctgtctgtggggatcgtctggactctgtgt tttgtactaacagaaacaaacgttttaccgactaattcgtccgtgcctgcttatgttgcccgaacagattctaagcttag tgttgtgtcaaatgccccttggttcgatttcccactcccttttgagtttggactaccaaccttcagtgcagcgggttatg tgggaatgctggccgccacaatatcctctatgatggaatctatcggggattactttgctgctggcagactatctcatgct ccacttcctcctgcgcatgcgctaaacagaggcatcgcatttgagggaatatctagcatcatatccggtatacttggagc aggacatgccactacctcctacagtactaatattggtgttattgctataaccaagatagccagccgtgcagtgtacatta tggctggtttcatcatgatagtatgtggtacggtgggcaaagtgggcgctgttctagctataatccctaatcctataata ggcggtgcgctcttgatagggcttgccctggtcgtgtctgttggtatatctgtgctgtcgtactgtgacatgtcctctat gaggaatatcaccatacttggttcaacagatgttgatcaagtgataagagtgttgtttgggactgcttccttcacaggtg gtataattggcttcttattggataatattatcccaggaacgattgaagaaagaggaatagagaaatggacatgtaaagca tcagatacaggagaatttactcaatgtagtgaagaagaactgaagctttatgagtatcctatagtgactccctacataag aaaaattcatctgtgttcatattttcctttatctcctacatttaacaaaaccatagactgtaaatgttgtcaacgaaaag atcgggaatactcacttccagattcacctaaggaagcattcgaactctctgtaacgataaacgacggcagtagtaaagga gatcagaagtaa |
Protein
Protein ID | pfu_aug2.0_1334.1_14969.t1 |
---|---|
Definition | - |
>pfu_aug2.0_1334.1_14969.t1 MSPVRSGQFATTILQGRWQYHILEKTGKTGCSGFSEQDSKRSKVMKIPEIVSGNIQMEISEQKTTGMKENNAKSRTKPDN SKIIYGVEDVPPYHMIFFFGLQQAIMCIGGTLSLPFLLSQLLCAGNQDDVRAKLLSLTLFMSGLATVVQCFLGVRLPIIQ GGSHTFIPPIVAMMTLDQFRCQPGEGIMPASENTTYSEDDWMLRMREIQGSIILASITQVLVGTLGLAGFLLKFIGPLTI APAISLIGLSLVEIVSDFCEPQWGISLATVCLIIIFSSVLNKVNVPIPAYNKHHGCHIAAFPLFQLLPIALSVGIVWTLC FVLTETNVLPTNSSVPAYVARTDSKLSVVSNAPWFDFPLPFEFGLPTFSAAGYVGMLAATISSMMESIGDYFAAGRLSHA PLPPAHALNRGIAFEGISSIISGILGAGHATTSYSTNIGVIAITKIASRAVYIMAGFIMIVCGTVGKVGAVLAIIPNPII GGALLIGLALVVSVGISVLSYCDMSSMRNITILGSTDVDQVIRVLFGTASFTGGIIGFLLDNIIPGTIEERGIEKWTCKA SDTGEFTQCSEEELKLYEYPIVTPYIRKIHLCSYFPLSPTFNKTIDCKCCQRKDREYSLPDSPKEAFELSVTINDGSSKG DQK |