Gene
| Gene Model ID | pfu_aug2.0_1334.1_14969 |
|---|---|
| Locus | scaffold1334.1 : 54317 ... 66825 : - |
| To GenomeBrowser | scaffold1334.1:54317..66825 |
| Genes list of scaffold | scaffold1334.1 |
| Synonym | pfu_aug1.0_9091.1_67981 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_1334.1_14969.t1 | 1 | 1 | Xan_ur_permease | 96 | 514 | 0.0 | 263.9 | 0.0 | 0.0 | 263.5 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_1334.1_14969.t1 | gi|585719693|ref|XP_006826111.1| | PREDICTED: LOW QUALITY PROTEIN: solute carrier family 23 member 2 [Saccoglossus kowalevskii] | 0.0 |
| pfu_aug2.0_1334.1_14969.t1 | gi|568941891|ref|XP_006506197.1| | PREDICTED: uncharacterized protein LOC243753 isoform X1 [Mus musculus] | 0.0 |
Transcript
| Transcript ID | pfu_aug2.0_1334.1_14969.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_1334.1_14969.t1 atgagccccgtccggtcaggtcagtttgctacgacaatactacaaggaagatggcagtatcatattttagagaaaaccgg gaaaacagggtgctctggatttagtgaacaggacagtaagcgatcaaaagttatgaaaattcctgaaattgtttcaggaa atatacaaatggaaattagtgaacaaaaaacgaccggaatgaaggaaaacaacgctaagtctagaaccaaaccggacaac agtaaaattatatatggtgtagaagacgtaccaccctaccatatgatattctttttcggtcttcagcaagccattatgtg tataggcgggactctctcccttccgtttctcttatcacaacttctatgcgcgggaaatcaagatgacgttagagcgaagc ttctcagtctgactttattcatgagcgggctagcaacggttgtacagtgtttccttggagtcagattaccaattatacaa ggaggctcccataccttcattcctccaatagtagccatgatgacgttagaccagttcagatgtcaaccgggagaaggtat tatgccagcgtcagaaaataccacatattctgaagacgattggatgttaaggatgagagaaatacagggtagtattatcc tggcttcgatcacacaggttttggtagggacgttaggattggctggatttcttcttaaatttattggaccactgacgata gctcccgctatatcacttataggactctcattggttgaaattgtgtcagatttctgtgaacctcagtgggggatatcgtt agcaaccgtttgcctgataatcatcttctcctcagtactcaacaaagtgaatgttccaatcccagcatacaacaaacatc atggctgtcatatagcggcatttcctttattccaactacttccgattgcgctgtctgtggggatcgtctggactctgtgt tttgtactaacagaaacaaacgttttaccgactaattcgtccgtgcctgcttatgttgcccgaacagattctaagcttag tgttgtgtcaaatgccccttggttcgatttcccactcccttttgagtttggactaccaaccttcagtgcagcgggttatg tgggaatgctggccgccacaatatcctctatgatggaatctatcggggattactttgctgctggcagactatctcatgct ccacttcctcctgcgcatgcgctaaacagaggcatcgcatttgagggaatatctagcatcatatccggtatacttggagc aggacatgccactacctcctacagtactaatattggtgttattgctataaccaagatagccagccgtgcagtgtacatta tggctggtttcatcatgatagtatgtggtacggtgggcaaagtgggcgctgttctagctataatccctaatcctataata ggcggtgcgctcttgatagggcttgccctggtcgtgtctgttggtatatctgtgctgtcgtactgtgacatgtcctctat gaggaatatcaccatacttggttcaacagatgttgatcaagtgataagagtgttgtttgggactgcttccttcacaggtg gtataattggcttcttattggataatattatcccaggaacgattgaagaaagaggaatagagaaatggacatgtaaagca tcagatacaggagaatttactcaatgtagtgaagaagaactgaagctttatgagtatcctatagtgactccctacataag aaaaattcatctgtgttcatattttcctttatctcctacatttaacaaaaccatagactgtaaatgttgtcaacgaaaag atcgggaatactcacttccagattcacctaaggaagcattcgaactctctgtaacgataaacgacggcagtagtaaagga gatcagaagtaa |
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Protein
| Protein ID | pfu_aug2.0_1334.1_14969.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_1334.1_14969.t1 MSPVRSGQFATTILQGRWQYHILEKTGKTGCSGFSEQDSKRSKVMKIPEIVSGNIQMEISEQKTTGMKENNAKSRTKPDN SKIIYGVEDVPPYHMIFFFGLQQAIMCIGGTLSLPFLLSQLLCAGNQDDVRAKLLSLTLFMSGLATVVQCFLGVRLPIIQ GGSHTFIPPIVAMMTLDQFRCQPGEGIMPASENTTYSEDDWMLRMREIQGSIILASITQVLVGTLGLAGFLLKFIGPLTI APAISLIGLSLVEIVSDFCEPQWGISLATVCLIIIFSSVLNKVNVPIPAYNKHHGCHIAAFPLFQLLPIALSVGIVWTLC FVLTETNVLPTNSSVPAYVARTDSKLSVVSNAPWFDFPLPFEFGLPTFSAAGYVGMLAATISSMMESIGDYFAAGRLSHA PLPPAHALNRGIAFEGISSIISGILGAGHATTSYSTNIGVIAITKIASRAVYIMAGFIMIVCGTVGKVGAVLAIIPNPII GGALLIGLALVVSVGISVLSYCDMSSMRNITILGSTDVDQVIRVLFGTASFTGGIIGFLLDNIIPGTIEERGIEKWTCKA SDTGEFTQCSEEELKLYEYPIVTPYIRKIHLCSYFPLSPTFNKTIDCKCCQRKDREYSLPDSPKEAFELSVTINDGSSKG DQK |
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