Gene
| Gene Model ID | pfu_aug2.0_1334.1_14972 |
|---|---|
| Locus | scaffold1334.1 : 99906 ... 103480 : + |
| To GenomeBrowser | scaffold1334.1:99906..103480 |
| Genes list of scaffold | scaffold1334.1 |
| Synonym | pfu_aug1.0_18216.1_18522 |
Manual annotation
Annotation by Blast2GO
| Annotation | GO |
|---|---|
| nitric oxide brain-like | GO:0003008 GO:0043167 GO:0044763 GO:0048519 GO:0048731 GO:0050896 GO:0097159 GO:1901363 |
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_1334.1_14972.t1 | 1 | 1 | NO_synthase | 1 | 51 | 1.5e-23 | 83.0 | 2.8e-27 | 2.1e-23 | 82.6 |
| pfu_aug2.0_1334.1_14972.t1 | 1 | 1 | Flavodoxin_1 | 77 | 125 | 3.6e-12 | 46.5 | 6.8e-16 | 5.0e-12 | 46.0 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_1334.1_14972.t1 | gi|390358640|ref|XP_003729305.1| | 9.0e-33 | |
| pfu_aug2.0_1334.1_14972.t1 | gi|632968452|ref|XP_007900533.1| | PREDICTED: nitric oxide synthase, brain [Callorhinchus milii] | 1.0e-29 |
Transcript
| Transcript ID | pfu_aug2.0_1334.1_14972.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_1334.1_14972.t1 atgactttcctagagaatgaacaggaggttcggggtggttgtcctgcagactgggtgtggatagtccctcccatcagtgg atcacttacagaggtgttccatcaagagatgatggtgtacaaactcaaaccttcgtatgagtaccagagctataaaagtg ataattcggctgatgcgtgcattgctctccttacggaagaagtgtgtgattttatatgccacagagactggaaggttgtg tgcatggctgattacgacattaggaacataagattccaagatttggttctggttgtgacaagtacttttggaaatggtga tccaccggaaaacggaaagacctttaagaacaaagtggaagatttacaattaaagaccgcaaaaaggtttgcaaagaata tcaaacatagctctaggagatga |
|
Protein
| Protein ID | pfu_aug2.0_1334.1_14972.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_1334.1_14972.t1 MTFLENEQEVRGGCPADWVWIVPPISGSLTEVFHQEMMVYKLKPSYEYQSYKSDNSADACIALLTEEVCDFICHRDWKVV CMADYDIRNIRFQDLVLVVTSTFGNGDPPENGKTFKNKVEDLQLKTAKRFAKNIKHSSRR |
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