Gene
| Gene Model ID | pfu_aug2.0_13370.1_03155 |
|---|---|
| Locus | scaffold13370.1 : 1 ... 2938 : + |
| To GenomeBrowser | scaffold13370.1:1..2938 |
| Genes list of scaffold | scaffold13370.1 |
| Synonym | pfu_aug1.0_143896.1_21232 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_13370.1_03155.t1 | 1 | 1 | zf-CCHC | 406 | 422 | 4.7e-08 | 32.5 | 3.7e-11 | 9.1e-08 | 31.6 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_13370.1_03155.t1 | gi|66799605|ref|XP_628728.1| | hypothetical protein DDB_G0294336 [Dictyostelium discoideum AX4] | 3.0e-14 |
| pfu_aug2.0_13370.1_03155.t1 | gi|512885369|ref|XP_004920375.1| | 2.0e-11 |
Transcript
| Transcript ID | pfu_aug2.0_13370.1_03155.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_13370.1_03155.t1 ctctcccaacatgcagttctaacatgattttaccaactggaaattccaactctatgtttccgacatgtgtctccaacatg tcgtttccaactaccaacccaaacttcatgccgccaatatatagttccaacaacacatttccaacaccaagttccaacaa catgccgctgtgtacaccctttgtacaacagaatcaggggcagacaactcataaagcatacaacactagtgggtgtctaa ccaatagcatgccatcaagctttaatgtgatgggtcagaatcatcagaacaggtttcctcacactgcatttttgaggcca catatggcacagggtttgcaaggaagaagtaatccagcatctgtagctgtatccagtgtaccattacccactacggttcc tgtaagtcagcagacaaatcagggacaaataatcaacaatggcggttttcatccatttaataatgcaagaattcagccac caaataaccaacagctacatggaaacatggtatacccctctgcatatgccacacatcctgtaattagtggtaataattct ggagtgacggcaaccaacgatgctatgcaggcttctcagttatcgcaagtgatccagctattgcaagatgtcgtgactaa cctggttcctggggcacctgaaaagagaagtagcatttcaaatgatggaaatagcctgtcaagtagagaagagagtgaag aattcactgagtctgagatctcaattgacaaacacatgtcaactagaaccaagaaagatggtagcctgaaaatcccctct tatgatggaaaagaatcgtggaagatatggaggaaccgtttcgaggaaatcgcagagagacgggcctggagcagtagtaa aagactggatgaactgcttcaaagaatgcaaggtgtagctggagagtttgaaccaagcaatcttaatgatgctgtaagtg aagtcattaacttcatggagacccatcagaagcaaatcaggtctgagcgaaaagctattaggggagtacagcagaaacca gatcaaatccagaaagatggacaagataaacaagacaggcagaggccgaagaaccataatgggacaaaggggaaggctga aaatttgcacaagaaggttccatcaatgacctttcaacctcaaggaccacctaggttcatgggtgcatacggccagaata attctggaagaaatgatcagtgttttaactgtggtcagaagggacatttagcaagggagtgtccacagaagcagatgatt ggtagggcaagtgagccaagcaggctaccaggtgtaaatatacctggaaaattaaatggcatagcagacccaggagccac aaaaactgttatttctaggaggagttatttaaagattcctgagggaagacgtcccacattgaccaaatgtactgacacaa ttacgggagccggaggaaaacttatacagaagatgggaaaggctaaatttgaaatagaattgtgtcccctttgctttcaa cgagagcttgttatagcaaacattgaagatgatgccctacttgggatagacattttacaaaatgaaggaggagcagcaga tatattactgagtgagggtattataaagttcatgggaaaatctattccttgtattcagatagggttacctggaagggaga ggagagttactgcaagtcaaaattaccatattccaccttattctgagatggttattaatgcagaaattgagcggaatgaa gaagaaacggaatgggatctaaatttagactgtctggcagctgcatatcgggcaacctcatgtgcctcaacaggcctgtc acctaacctcttaatgttaggaagggaagtctgcctctcggtagatatcatatttggtcaaccaaaatcttatgagggaa atataataacaaagggaagttacctgcaggagttccgtgagaaaataaataaagcccatgcgatcgccaggaaacaactt cagcaatctgcaaattatcacaagtgtcgttatgatcagaaggcatctataagtccatacaatccaggagattatgcgtt gtacctgcacgaagagagaaaagaaggggagtgtagtaagctgcaccctctgtatcatggaccctttgttgttgtccaaa gaatcaatgatttagtttattga |
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Protein
| Protein ID | pfu_aug2.0_13370.1_03155.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_13370.1_03155.t1 LPTCSSNMILPTGNSNSMFPTCVSNMSFPTTNPNFMPPIYSSNNTFPTPSSNNMPLCTPFVQQNQGQTTHKAYNTSGCLT NSMPSSFNVMGQNHQNRFPHTAFLRPHMAQGLQGRSNPASVAVSSVPLPTTVPVSQQTNQGQIINNGGFHPFNNARIQPP NNQQLHGNMVYPSAYATHPVISGNNSGVTATNDAMQASQLSQVIQLLQDVVTNLVPGAPEKRSSISNDGNSLSSREESEE FTESEISIDKHMSTRTKKDGSLKIPSYDGKESWKIWRNRFEEIAERRAWSSSKRLDELLQRMQGVAGEFEPSNLNDAVSE VINFMETHQKQIRSERKAIRGVQQKPDQIQKDGQDKQDRQRPKNHNGTKGKAENLHKKVPSMTFQPQGPPRFMGAYGQNN SGRNDQCFNCGQKGHLARECPQKQMIGRASEPSRLPGVNIPGKLNGIADPGATKTVISRRSYLKIPEGRRPTLTKCTDTI TGAGGKLIQKMGKAKFEIELCPLCFQRELVIANIEDDALLGIDILQNEGGAADILLSEGIIKFMGKSIPCIQIGLPGRER RVTASQNYHIPPYSEMVINAEIERNEEETEWDLNLDCLAAAYRATSCASTGLSPNLLMLGREVCLSVDIIFGQPKSYEGN IITKGSYLQEFREKINKAHAIARKQLQQSANYHKCRYDQKASISPYNPGDYALYLHEERKEGECSKLHPLYHGPFVVVQR INDLVY |
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