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OIST Marine Genomics Unit since 2008

Gene
Gene Model IDpfu_aug2.0_1339.1_31621
Locus scaffold1339.1 : 14866 ... 21161 : +
To GenomeBrowser scaffold1339.1:14866..21161
Genes list of scaffold scaffold1339.1
Synonym pfu_aug1.0_227.1_00197

Manual annotation
Hmmer Search for Pfam
query Total ID Target From To Eval Score cEval iEval Score
pfu_aug2.0_1339.1_31621.t1 2 1 ADH_zinc_N 151 203 8.6e-09 35.0 1.2e-11 1.8e-07 30.7
pfu_aug2.0_1339.1_31621.t1 2 2 ADH_zinc_N 210 234 8.6e-09 35.0 0.0076 110.0 2.3

Blast Hit to nr / sp
query Subject ID Subject Name evalue
pfu_aug2.0_1339.1_31621.t1 gi|119113759|ref|XP_310684.3| AGAP000414-PA [Anopheles gambiae str. PEST] 0.0
pfu_aug2.0_1339.1_31621.t1 gi|157129132|ref|XP_001655303.1| AAEL011356-PA [Aedes aegypti] 0.0
pfu_aug2.0_1339.1_31621.t1 gi|157132518|ref|XP_001656050.1| AAEL012457-PA [Aedes aegypti] 0.0
pfu_aug2.0_1339.1_31621.t1 gi|347963537|ref|XP_310833.5| AGAP000288-PA [Anopheles gambiae str. PEST] 0.0

Transcript
Transcript IDpfu_aug2.0_1339.1_31621.t1
Definition-
>pfu_aug2.0_1339.1_31621.t1
atggtgaaagctaagaaatggatacttgctgaggcatacagtggtgacccaaaactgtcaaacttcagaatggaggagga
gaccctcccagacaacccacgaaacggagaggtgttgtgtgaggcgctgtacctatccgtggacccctacatgacaatat
ttgcgggaccagtgggtgatgtggcagtcggcgaacaagtggctagagttataggtagtggtcactcagacttccccgtg
ggtactatagtatctctgatgtcaggatggaggacccacaccctggtcaaggacgtgtcacagctaacaaaggtccccga
cataggtagtctccccctgtctctaccccttggaatactgggtatgccaggaatgacagcttattttggatttctggaag
gctgtagtcctaaagctggagagaccgttatggtcagcacagcggccggagcagtgggcagtgttgttggtcagatagct
aaaataaaggaatgttatgttatcggcagtgcggggagcgacgagaaagtaaaatggatgaaggaggaacttggctttga
tctggtgtttaactataaaaaggtagatgtaaaagaagtcctgaaatcttatggaaaacatccatataatttgattctga
tgaagcagctacgtttgcagggcattatgggatggaatcatgtacaggattggccaaaaggaatcgttcaaatgagagag
tggatagagcagggtaagatgaagtacagagagacaataactgaaggctttgaaaacatgtgcacagcgtttgttggact
ttttaccggagccaatacagggaaagccatcgtcaaagcataa

Protein
Protein IDpfu_aug2.0_1339.1_31621.t1
Definition-
>pfu_aug2.0_1339.1_31621.t1
MVKAKKWILAEAYSGDPKLSNFRMEEETLPDNPRNGEVLCEALYLSVDPYMTIFAGPVGDVAVGEQVARVIGSGHSDFPV
GTIVSLMSGWRTHTLVKDVSQLTKVPDIGSLPLSLPLGILGMPGMTAYFGFLEGCSPKAGETVMVSTAAGAVGSVVGQIA
KIKECYVIGSAGSDEKVKWMKEELGFDLVFNYKKVDVKEVLKSYGKHPYNLILMKQLRLQGIMGWNHVQDWPKGIVQMRE
WIEQGKMKYRETITEGFENMCTAFVGLFTGANTGKAIVKA

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