Gene
| Gene Model ID | pfu_aug2.0_1339.1_31623 |
|---|---|
| Locus | scaffold1339.1 : 64946 ... 93005 : + |
| To GenomeBrowser | scaffold1339.1:64946..93005 |
| Genes list of scaffold | scaffold1339.1 |
| Synonym | pfu_aug1.0_10948.1_10234 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_1339.1_31623.t1 | 3 | 1 | COMPASS-Shg1 | 20 | 120 | 1.1e-15 | 57.7 | 1.5e-19 | 1.1e-15 | 57.7 |
| pfu_aug2.0_1339.1_31623.t1 | 3 | 2 | COMPASS-Shg1 | 433 | 492 | 1.1e-15 | 57.7 | 0.26 | 2000.0 | -0.9 |
| pfu_aug2.0_1339.1_31623.t1 | 3 | 3 | COMPASS-Shg1 | 554 | 579 | 1.1e-15 | 57.7 | 1.1 | 7900.0 | -2.9 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_1339.1_31623.t1 | gi|676450123|ref|XP_009052276.1| | hypothetical protein LOTGIDRAFT_57578, partial [Lottia gigantea] | 2.00386e-43 |
| pfu_aug2.0_1339.1_31623.t1 | gi|524885650|ref|XP_005099430.1| | PREDICTED: microtubule-associated protein futsch-like [Aplysia californica] | 6.0e-40 |
| pfu_aug2.0_1339.1_31623.t1 | gi|291237692|ref|XP_002738767.1| | PREDICTED: biorientation of chromosomes in cell division protein 1-like 1-like [Saccoglossus kowalevskii] | 5.0e-38 |
| pfu_aug2.0_1339.1_31623.t1 | gi|157422830|gb|AAI53356.1| | LOC100127583 protein [Xenopus (Silurana) tropicalis] | 1.0e-36 |
| pfu_aug2.0_1339.1_31623.t1 | gi|632976527|ref|XP_007904844.1| | PREDICTED: biorientation of chromosomes in cell division protein 1 [Callorhinchus milii] | 3.0e-36 |
Transcript
| Transcript ID | pfu_aug2.0_1339.1_31623.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_1339.1_31623.t1 atggacacatcaacgcaaaacgagggggacacaggtggcgacgacaaagatgtgcggcaaataattgaccagctcaagtc acaagggctgtttgatcagttcaggaaagatttactttcagatgttgatacaaagcctgcatatcagaacttaaaccaaa gagtagaaggttacgtaaacaggtttctatcaaggcaaatatggtcaccaagattaaacaaaaatcagcttcgagacaac ctgagacggcagatcaaccagtcaggaatgttgatcaatggagtggagagagtgatcaatcaggttgtagacccaaagat cttacaagttataaaaccgaaaatagacgaggtggtgtgctcttactttggtatagacctaaaagagagacagaggcaac tggaagcccacaaacaacaacaaaaacaaaaactgcagagcctgatgaatctgaacgtggcacccccaggaaatgtacca gacaagacggaccaacaatcagatccatccttaatgaagacaaacacaaacttccctcctggctttccgcccgatgtatg gcagcagcaggtacaacagcaaagcctgctgggatttcccggcggaatgatgaacttccctatggctactccgtttccgc aacaaatgggcttcgggatgtctccacagggcttccctaacatgcaaaattcatggaacaatttcatgtttccgcctatg tcgggacaaatgacgtctgtgccaatgggaacctccacaacgaacagtgttaccacttcagttactgtcaccacgtccgc tattggttctaccactcctaccatgagtaccagtgccgccgatgaagtatcccctcccaagccggacttacctccccttc ccccgaccccaccacccccaggaacggagggagaggttgaggaggatatcattaagcctaaggtgttagatgacatcccc ctccctcctacagttcccaagggagagttagtggaggaagaagaggtgccaagtttggatgaaatcccacttccgccacc aagtgataatgtggaaggggaagatacagagggtaatatgtcacagagtgccattagtgccaggatggcagaactcgaag ccagcatacagggaaccctgtcacatgatgccagtccgccaaagaagaagctggtgtcgctacagtataactatagtgat agcgatgacgaggaaacaagagaagaaagaagggcaagaattgatcttgagcaggagcttgagtctgatctaagtggttt tgatcaggatcttgaacaggatcttgaggctgatcttgagcaggatcttcagcctgatccaagtgatcttgagcctaatc ttgagcaggatcttgaacaggatcttgaacaggatcttgagtctgatctaagtgatcttgaacatgatcttgagcaggat cttgaacaggatcttgagcctgatctaagtgatcttgagcaggatcttgaacaggatcttgagcatgatcttgagcctga tctaaactctggtgataaaaaggaagaaaacgaagctagccaagaagacagttcacataaggagagtgctgataattcga tgagcagtcctatgaaaaaagttcctgagtctccagataaacggctgaagcagccacgatccccagagaaaaagaacaga aagtcaaaggctgaacttaaagaggaacgagtgaagcagaaagtcatggaaaaaaaggctgctctcaggagacagagaac acgtaatagaaggtatacatcagaggagtttacatccatattcaatgagaagcagcaaccttacaccagtcaaagttact cagagctagtgatggaagaacaagtagtcgaagagacctatggaggtcactgtggattatcctggtgtggaggtggaaca tactggaatgaagatgattctagaactgtagacagtgatagtaaatccaagcaagctaaatccaggtcctctcacaaaaa gagaaagaggaggaagaggaagaagaaggtcaagaagaggtcaaggtcgcgttctggttcagcgccttctcatacaagag atggagccagtcctatatcatcctcatctctgtctatatcagaatcgtcaaggtcaagacacagcagtagatcttcaagg tcaggcagcagatcctcaaggtcaaaaacaaaatcaaggtcaaggtctagatcctctgaatcctctgtggatgagtttgg gagaaggaagcgtaaaggcagtcttcccttggactatgttgattttggagaggcagccaagatggcaaggagaagtttgg taggagtggactttggtgaggcagagaggaggagcaaacaagaaagaggaatgccaatcaccactcccacagtgggtggt gaaggaaagataccctttcagaagactgcagttccgggtatgtttggtttgccagtaccagggcccgcggaaaatcctta taatgtcaatcaaagaagaccattcagaaagaggggaggatttcagcaaaccagaggaggaggtaggggcgtacctaaaa ccaacgctctgcgcaaaaactggttccaaggtggatggaattatcaagatggatctagtacggggcaaacttcaggttct gatgctgggatgcgtaattctccaccaatgtcaccgtctcgcagatactacagctctgatatgcctaggatcgatgatga tttggagtcattatcgcctgagtcggacggtgatttatcaccccatgagcaacagagacgataccgagcaatgtcgcagt cttctccccctccgtatggacctcgaggaaggctttcacccgtgtctatgtatccgtatgacgatccagaaatgtcaccg actcatatgcgtggacagtcacctatatacatgagagacagatcgccttcacctttatcaccccatcacatacccggcag acgacccatgtcgcctctgtcgccccgtatgagagttaggaggagtccatccgacagccctccccctccccatgtcagaa tgagacgttcggattcccctccctcacctccttatgtaagaggaaggcgaagtttatcacctgtatcacctacacatatg agaggtagacgatcaatttctatctcaccaccacctaggtcacaatcacctttttcaccccctcatctgcgaggtcatag aagcccctcccccatacccaggggtgctacaaggggaatgatgcctccatcccctacagcctattcccatagaaggagag gtatatcaccaccacatcctgctatgagaggtcataggtcaccctcacctgaggaatatccaatgtatagatctccctcc cccatgcacaggcctatcaccaggggctatcactcacccgcccattccctttctccccctcgtatgtcaaaatccccatc ccctccccatagacctattacaaggggatactcacccactcgatcaccgtcccctcccagtagacctgtaaccaggggta aaagagcatcttcccctcttgcaaaggggggtaagaaatctcagcaagtgcccctgtctccacctgcagtgggtatgttg tcaaggttacgagccaaacacacagccccagacagatattctccgaccccaacccagaaaggtagacaacggcccccatc tccaccagcagcgcagggaaaacctgaaaagaaaaaacgatga |
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Protein
| Protein ID | pfu_aug2.0_1339.1_31623.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_1339.1_31623.t1 MDTSTQNEGDTGGDDKDVRQIIDQLKSQGLFDQFRKDLLSDVDTKPAYQNLNQRVEGYVNRFLSRQIWSPRLNKNQLRDN LRRQINQSGMLINGVERVINQVVDPKILQVIKPKIDEVVCSYFGIDLKERQRQLEAHKQQQKQKLQSLMNLNVAPPGNVP DKTDQQSDPSLMKTNTNFPPGFPPDVWQQQVQQQSLLGFPGGMMNFPMATPFPQQMGFGMSPQGFPNMQNSWNNFMFPPM SGQMTSVPMGTSTTNSVTTSVTVTTSAIGSTTPTMSTSAADEVSPPKPDLPPLPPTPPPPGTEGEVEEDIIKPKVLDDIP LPPTVPKGELVEEEEVPSLDEIPLPPPSDNVEGEDTEGNMSQSAISARMAELEASIQGTLSHDASPPKKKLVSLQYNYSD SDDEETREERRARIDLEQELESDLSGFDQDLEQDLEADLEQDLQPDPSDLEPNLEQDLEQDLEQDLESDLSDLEHDLEQD LEQDLEPDLSDLEQDLEQDLEHDLEPDLNSGDKKEENEASQEDSSHKESADNSMSSPMKKVPESPDKRLKQPRSPEKKNR KSKAELKEERVKQKVMEKKAALRRQRTRNRRYTSEEFTSIFNEKQQPYTSQSYSELVMEEQVVEETYGGHCGLSWCGGGT YWNEDDSRTVDSDSKSKQAKSRSSHKKRKRRKRKKKVKKRSRSRSGSAPSHTRDGASPISSSSLSISESSRSRHSSRSSR SGSRSSRSKTKSRSRSRSSESSVDEFGRRKRKGSLPLDYVDFGEAAKMARRSLVGVDFGEAERRSKQERGMPITTPTVGG EGKIPFQKTAVPGMFGLPVPGPAENPYNVNQRRPFRKRGGFQQTRGGGRGVPKTNALRKNWFQGGWNYQDGSSTGQTSGS DAGMRNSPPMSPSRRYYSSDMPRIDDDLESLSPESDGDLSPHEQQRRYRAMSQSSPPPYGPRGRLSPVSMYPYDDPEMSP THMRGQSPIYMRDRSPSPLSPHHIPGRRPMSPLSPRMRVRRSPSDSPPPPHVRMRRSDSPPSPPYVRGRRSLSPVSPTHM RGRRSISISPPPRSQSPFSPPHLRGHRSPSPIPRGATRGMMPPSPTAYSHRRRGISPPHPAMRGHRSPSPEEYPMYRSPS PMHRPITRGYHSPAHSLSPPRMSKSPSPPHRPITRGYSPTRSPSPPSRPVTRGKRASSPLAKGGKKSQQVPLSPPAVGML SRLRAKHTAPDRYSPTPTQKGRQRPPSPPAAQGKPEKKKR |
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