Gene
| Gene Model ID | pfu_aug2.0_1339.1_31625 |
|---|---|
| Locus | scaffold1339.1 : 110676 ... 126515 : + |
| To GenomeBrowser | scaffold1339.1:110676..126515 |
| Genes list of scaffold | scaffold1339.1 |
| Synonym | pfu_aug1.0_8568.1_17327 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_1339.1_31625.t1 | 2 | 1 | Laminin_G_1 | 79 | 104 | 1.1e-06 | 28.6 | 0.096 | 480.0 | 0.7 |
| pfu_aug2.0_1339.1_31625.t1 | 2 | 1 | Laminin_G_2 | 80 | 105 | 1.3e-14 | 54.2 | 0.59 | 2900.0 | -1.8 |
| pfu_aug2.0_1339.1_31625.t1 | 2 | 2 | Laminin_G_2 | 190 | 318 | 1.3e-14 | 54.2 | 5.1e-18 | 2.5e-14 | 53.4 |
| pfu_aug2.0_1339.1_31625.t1 | 2 | 2 | Laminin_G_1 | 190 | 318 | 1.1e-06 | 28.6 | 2.0e-09 | 9.7e-06 | 25.6 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_1339.1_31625.t1 | gi|571541806|ref|XP_006558703.1| | PREDICTED: neurexin-4 isoform X2 [Apis mellifera] | 2.0e-12 |
| pfu_aug2.0_1339.1_31625.t1 | gi|571541813|ref|XP_006558704.1| | PREDICTED: neurexin-4 isoform X3 [Apis mellifera] | 2.0e-12 |
| pfu_aug2.0_1339.1_31625.t1 | gi|571541810|ref|XP_624195.4| | PREDICTED: neurexin-4 isoform X6 [Apis mellifera] | 2.0e-12 |
Transcript
| Transcript ID | pfu_aug2.0_1339.1_31625.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_1339.1_31625.t1 atgaacaatgctggggaacagtataactatacggaaataatttcattcagtaatggaagtattgttacaaaatgcagaac atactggaaaagaaactctcacacacagaaaaccaaggatacaattactactacaccaatcgatgacgttctaatatatc aaacacttcttgatgggtctcagacggcagagaacgatcctgtcacattccctttgttgtctaacattaaggaaggaagt attactgtcgtggaagtggatacagaaagtagcaccacaagttccacaaaaccaacaaccactcaaacttcaaccaccgc tagcacaaccacaacatattctacaaaactggcctcgacatcaacccaagtaatacaaacaacaaaaacaatgaccacaa cacaaactactccaacaacaaggactacagaaacaatgagattaactactactacagcagaaagagtgcaaggaattaat attccagatcacaacgttatgataagatacacactagatcaaaatcaaggaatatatttctccgattttatgaacattag tgttcggttcagcacattatataaccagggtttcctattctggataaatgatgaagctacctcagattacgtgtcaatgg atataaacgatttcggtcgtgtgaggtttactgcaaaagcgagatatgagagggttgaagtaaattctgcaaatgttgga tattcatacacagatggcaaagaacatacagttcggatgtggagaacaggaagtgatgcaaacgaactgcatttacaggt tgacaacgaccaagaagcacttttaagtatgacacaaccatcaattctcagcaatgatcccatacttacgaagcctaaat ttatgtatctaggtaaaaatgaaacaacccagaatggatttaagggctgtatatctcacattgagatagatggtgtcaat cctttagtagaaatatatagagttccccgtccctcattcattgatgccacaccaaacaatacaattcttcgaaatgacgt ttgtggatatgatgacatcactgtagatgttagtgattcagtatgtcaaaatgaatccctgttagtacagtttgctcttc cttgcctggccacaaatcttggaagtgtcttggcagcccaaaaccaaaccatattttgcagtgttttagagaatatagca gactgtatcgtggatagaatataccttgccacgtccgtacaatgtacagatgacgataaatatgatgctgtgagaaaatt cgaaagtcaactcaatatagtgtttgcaacatatggaataacataccaaatacagccatgcttaccgccatga |
|
Protein
| Protein ID | pfu_aug2.0_1339.1_31625.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_1339.1_31625.t1 MNNAGEQYNYTEIISFSNGSIVTKCRTYWKRNSHTQKTKDTITTTPIDDVLIYQTLLDGSQTAENDPVTFPLLSNIKEGS ITVVEVDTESSTTSSTKPTTTQTSTTASTTTTYSTKLASTSTQVIQTTKTMTTTQTTPTTRTTETMRLTTTTAERVQGIN IPDHNVMIRYTLDQNQGIYFSDFMNISVRFSTLYNQGFLFWINDEATSDYVSMDINDFGRVRFTAKARYERVEVNSANVG YSYTDGKEHTVRMWRTGSDANELHLQVDNDQEALLSMTQPSILSNDPILTKPKFMYLGKNETTQNGFKGCISHIEIDGVN PLVEIYRVPRPSFIDATPNNTILRNDVCGYDDITVDVSDSVCQNESLLVQFALPCLATNLGSVLAAQNQTIFCSVLENIA DCIVDRIYLATSVQCTDDDKYDAVRKFESQLNIVFATYGITYQIQPCLPP |
|