Gene
| Gene Model ID | pfu_aug2.0_134.1_13656 |
|---|---|
| Locus | scaffold134.1 : 117000 ... 158598 : - |
| To GenomeBrowser | scaffold134.1:117000..158598 |
| Genes list of scaffold | scaffold134.1 |
| Synonym | pfu_aug1.0_1210.1_00646 |
Manual annotation
Annotation by Blast2GO
| Annotation | GO |
|---|---|
| gephyrin-like isoform x1 | GO:0006777 |
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_134.1_13656.t1 | 1 | 1 | MoeA_N | 15 | 162 | 6.02558e-44 | 149.2 | 0.0 | 9.24857e-44 | 148.6 |
| pfu_aug2.0_134.1_13656.t1 | 2 | 1 | MoeA_C | 47 | 58 | 2.4e-15 | 56.2 | 2.1 | 10000.0 | -3.5 |
| pfu_aug2.0_134.1_13656.t1 | 1 | 1 | MoCF_biosynth | 175 | 317 | 5.6e-28 | 97.1 | 1.7e-31 | 8.2e-28 | 96.6 |
| pfu_aug2.0_134.1_13656.t1 | 2 | 2 | MoeA_C | 331 | 404 | 2.4e-15 | 56.2 | 1.3e-18 | 6.7e-15 | 54.8 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_134.1_13656.t1 | gi|524868021|ref|XP_005090817.1| | PREDICTED: gephyrin-like [Aplysia californica] | 0.0 |
| pfu_aug2.0_134.1_13656.t1 | gi|676448095|ref|XP_009051622.1| | hypothetical protein LOTGIDRAFT_104386, partial [Lottia gigantea] | 0.0 |
| pfu_aug2.0_134.1_13656.t1 | gi|700319123|ref|XP_009910881.1| | PREDICTED: gephyrin [Haliaeetus albicilla] | 0.0 |
| pfu_aug2.0_134.1_13656.t1 | gi|667281771|ref|XP_008574539.1| | PREDICTED: gephyrin, partial [Galeopterus variegatus] | 0.0 |
| pfu_aug2.0_134.1_13656.t1 | gi|593762176|ref|XP_007119741.1| | PREDICTED: gephyrin-like [Physeter catodon] | 0.0 |
Transcript
| Transcript ID | pfu_aug2.0_134.1_13656.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_134.1_13656.t1 atgcaccaaatgtcaatcgtgtgtcctgtagcatcatatcccacccatcctgctacgtctttcgagagtatcggtagaat tcttgcagaggatgtgttcgccaaggatcccctaccaccatttcctgcttctataaaggacggatatgctgtcctcgcat cagatggcgacggaatgcggttagtggccggagattccacagctggagatgttccgaaaaacaaggtaatgccaggctac tgtgtgcgcataaacaccggtgcccctttgccatcaggggcggatgcagtgatacaagtagaggacacgctgcttgagag gggatctgaagacggtcgtgaagaactagaaatcaaaataatgacggttccaaagcctggtcaggatatacggccagttg gatcagatatagcaaaaggggagatgatcctgtccaagggacagaatctagggccggcagagttagggctattggcaact gttggtgttacttcaattctgtgttatcagcaaccaattgtaggcgttatgtcaaccggaaacgagttggtagagcctac agaggatctccaagaagggaaaatcagagacagtaacagaacaacgcttatatcacaaatagaggaacacggatatcacg tgattgatctgggaattgcaaaggatacaccagatgcagttttggcacttttcaaacaggctttacagtcagttgacgtc attgtcacgtcaggtggggtatcgatgggtgaaaaggacctcttgaagcatgtacttgagacagacctgaaagcaaatat taagtttggaagagttttcatgaagcctgggaaacctacagcatttgctacaatagagtacaatagcaagaagcatatat tctttgggttgccagggaatcctgtgtcctctatcgtaacgtgtaacttgtatgttattccagcactagccaaaatgtca ggaaatccgcttcatcagcgtacaatagtgaaagccaagcttgagaagtccgtttatttggatcccagaccagagtatca tcgtgttgtcctgcagtggctctatgatgatccagtacctgtcgcatcaagcaccggaaatcaaataagtagcagacttc tgagtatgcgcactgcaaatgcactattaatgcttcctccaaaaacagaaaagcggcagatgatggagaagggttgtctc gtagacgccatgattataggtcgtttgtga |
|
Protein
| Protein ID | pfu_aug2.0_134.1_13656.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_134.1_13656.t1 MHQMSIVCPVASYPTHPATSFESIGRILAEDVFAKDPLPPFPASIKDGYAVLASDGDGMRLVAGDSTAGDVPKNKVMPGY CVRINTGAPLPSGADAVIQVEDTLLERGSEDGREELEIKIMTVPKPGQDIRPVGSDIAKGEMILSKGQNLGPAELGLLAT VGVTSILCYQQPIVGVMSTGNELVEPTEDLQEGKIRDSNRTTLISQIEEHGYHVIDLGIAKDTPDAVLALFKQALQSVDV IVTSGGVSMGEKDLLKHVLETDLKANIKFGRVFMKPGKPTAFATIEYNSKKHIFFGLPGNPVSSIVTCNLYVIPALAKMS GNPLHQRTIVKAKLEKSVYLDPRPEYHRVVLQWLYDDPVPVASSTGNQISSRLLSMRTANALLMLPPKTEKRQMMEKGCL VDAMIIGRL |
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