Gene
| Gene Model ID | pfu_aug2.0_134.1_13660 |
|---|---|
| Locus | scaffold134.1 : 232815 ... 253952 : - |
| To GenomeBrowser | scaffold134.1:232815..253952 |
| Genes list of scaffold | scaffold134.1 |
| Synonym | pfu_aug1.0_15477.1_32554 |
Manual annotation
Annotation by Blast2GO
| Annotation | GO |
|---|---|
| two pore calcium channel protein 1-like | GO:0006811 GO:0055085 |
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_134.1_13660.t1 | 2 | 1 | Ion_trans | 154 | 295 | 5.8e-34 | 117.0 | 8.1e-12 | 6.0e-08 | 32.1 |
| pfu_aug2.0_134.1_13660.t1 | 2 | 2 | Ion_trans | 436 | 646 | 5.8e-34 | 117.0 | 1.1e-29 | 8.0e-26 | 90.5 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_134.1_13660.t1 | gi|524900842|ref|XP_005106838.1| | PREDICTED: two pore calcium channel protein 1-like [Aplysia californica] | 0.0 |
| pfu_aug2.0_134.1_13660.t1 | gi|676459032|ref|XP_009055169.1| | hypothetical protein LOTGIDRAFT_232558 [Lottia gigantea] | 0.0 |
| pfu_aug2.0_134.1_13660.t1 | gi|558130928|ref|XP_006116320.1| | PREDICTED: two pore calcium channel protein 1-like [Pelodiscus sinensis] | 0.0 |
| pfu_aug2.0_134.1_13660.t1 | gi|269993233|emb|CBI63265.1| | two-pore channel 3 [Strongylocentrotus purpuratus] | 0.0 |
| pfu_aug2.0_134.1_13660.t1 | gi|222353682|ref|NP_001138449.1| | two-pore calcium channel 3 [Strongylocentrotus purpuratus] | 0.0 |
Transcript
| Transcript ID | pfu_aug2.0_134.1_13660.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_134.1_13660.t1 atggatgtaccaaaagtagtaatagatattgccgccgatgaaacgaacccatcggagcaggaggctactcaatctaatga taatgcaaactccatattaccaccaccaccatctataaaaagagaatctctgggccatgatgaaaaaggggaacttcata gaaacaataataatagatcttcattagaggtaccttctgttcaaacggagaatggaaacaaagggtccacatctcagaat tctgttaattcacataataatctatctgcaagttcacctcgaggttcacctgaagcagtacgaagatccagtagccaaga acaactccatgttggagaagaggatttgttactggcagcaactcttgtacaagatgcaaaacagggacggaatatgtcat ttaaaaaagatgccatgtatgtcaagtcctataatctgtacaacaagttttacctccgctggttgctgtatttcttcctt gctctggacatggtattagcattgatagagaaacctgcacgagatggctggttggtaccttactggcttaccgtcataga catcatttgttacttgatatgggacaatctacagtcaccgtcccatgctatacgatggtcacgaccattaagacctctct ttatgatcaattttccagatggaaaacaggtgagacgggcattcagaaacattcgccgtacattacctgaaatactcaac gtccttatattgtttataatgatggtcctactgtttgctttgttagcattaaagctcttcagcagaaggactttagtgta tcctaatggcagagcatacttcaaaaattactgggagagtatatgggacctgtatgtgctagtcaccactgctaataacc cagataatgaagtaaaagctgctgtatatatgaagagaaagaaactaagtcaagcatttgacatactaaagtcagagagg gatggtcggtttgttattacgttcccagtatggtgtgctttaatgaagaaagtgatccccagtagaagtaggagtcatat tgatctgttagtacgagtcttagatattgatggggataatgctgtccgaaagagtcagtttttgaagctagcagatctac tagagcttcctctgacagaggtcaaggacagacagactttcttagaaaagatggtcccaaatatttacaattctaaagcc agtagttacctgaaatttgctgtacgccactgggttttcagatggacattttacatcctaatctttgggaatgcctggtt catagcctttgatgtggacgaggcagattgggcgtttctttctgtgttcatggtagaaataatactcaagatgtatgtcc ttggtcctaaggagttctttaagaaagcttggaatacttttgacttcatagtgataggggctgcagtcattgtatcatct attgaggccatagaagaagcttcttatgaagagtttcagcttctggattacttactggtgcttagagttttgaggttatt caaaatttttggcagtatcaagagatttaaggtcattttacaaactgtagcaaacattattccgtccataacaacatatg gtgctgtcatatatgtaacctattatttctttgcaatcattggtatggagttattcgggggccttatcaagttttacggc cctgcagacacagggcatccattctgtggcaatgatgctctaaataatacctactttgctatgttccattactgtaataa caactttaatgacatgatacggtcacttgtcgtgctgtttgaactcatggtagtcaaccagtggcatgttctggcgtcag gatttgtacaggtgactaacgtagcggtgagagcatacttctttgcattccatatgtggtgtgttattataatactcaat atttttatagcatttgtgctggaagcatttatgttggaatacacaatacaaaaggcaggaaagttggagtcttatgtgga aagaaagataaaagatctaggacttggactagggcaaacttatgccttccgtaagaacacgagacaagctgatgatctcg agcttgtagagaatgaggaacttcctcatatgaacgtaacgacggaggaggaagacgattctgatacggacagtatccca gatctatctcatgagaaaggactcaggttccatctacagaaaaagtcacggaaaaaggtagaggtgcttctccaacagat gtttgaaggtgagatagatcctaatgacgagggtccagataaccaggacgatctctacgcggagagtagacccaggagac tgactctggatactgttacatag |
|
Protein
| Protein ID | pfu_aug2.0_134.1_13660.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_134.1_13660.t1 MDVPKVVIDIAADETNPSEQEATQSNDNANSILPPPPSIKRESLGHDEKGELHRNNNNRSSLEVPSVQTENGNKGSTSQN SVNSHNNLSASSPRGSPEAVRRSSSQEQLHVGEEDLLLAATLVQDAKQGRNMSFKKDAMYVKSYNLYNKFYLRWLLYFFL ALDMVLALIEKPARDGWLVPYWLTVIDIICYLIWDNLQSPSHAIRWSRPLRPLFMINFPDGKQVRRAFRNIRRTLPEILN VLILFIMMVLLFALLALKLFSRRTLVYPNGRAYFKNYWESIWDLYVLVTTANNPDNEVKAAVYMKRKKLSQAFDILKSER DGRFVITFPVWCALMKKVIPSRSRSHIDLLVRVLDIDGDNAVRKSQFLKLADLLELPLTEVKDRQTFLEKMVPNIYNSKA SSYLKFAVRHWVFRWTFYILIFGNAWFIAFDVDEADWAFLSVFMVEIILKMYVLGPKEFFKKAWNTFDFIVIGAAVIVSS IEAIEEASYEEFQLLDYLLVLRVLRLFKIFGSIKRFKVILQTVANIIPSITTYGAVIYVTYYFFAIIGMELFGGLIKFYG PADTGHPFCGNDALNNTYFAMFHYCNNNFNDMIRSLVVLFELMVVNQWHVLASGFVQVTNVAVRAYFFAFHMWCVIIILN IFIAFVLEAFMLEYTIQKAGKLESYVERKIKDLGLGLGQTYAFRKNTRQADDLELVENEELPHMNVTTEEEDDSDTDSIP DLSHEKGLRFHLQKKSRKKVEVLLQQMFEGEIDPNDEGPDNQDDLYAESRPRRLTLDTVT |
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