Gene
| Gene Model ID | pfu_aug2.0_134.1_13664 |
|---|---|
| Locus | scaffold134.1 : 352533 ... 379732 : + |
| To GenomeBrowser | scaffold134.1:352533..379732 |
| Genes list of scaffold | scaffold134.1 |
| Synonym | pfu_aug1.0_4955.1_67108 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_134.1_13664.t1 | 1 | 1 | Tetraspannin | 10 | 296 | 5.4e-34 | 117.3 | 3.0e-35 | 3.2e-32 | 111.6 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_134.1_13664.t1 | gi|676445041|ref|XP_009050626.1| | hypothetical protein LOTGIDRAFT_174048 [Lottia gigantea] | 8.96831e-44 |
| pfu_aug2.0_134.1_13664.t1 | gi|524892782|ref|XP_005102916.1| | PREDICTED: CD151 antigen-like [Aplysia californica] | 1.0e-38 |
| pfu_aug2.0_134.1_13664.t1 | gi|675876376|ref|XP_009023748.1| | hypothetical protein HELRODRAFT_193067 [Helobdella robusta] | 1.0e-29 |
| pfu_aug2.0_134.1_13664.t1 | gi|684381511|ref|XP_009166954.1| | hypothetical protein T265_04055 [Opisthorchis viverrini] | 6.0e-23 |
Transcript
| Transcript ID | pfu_aug2.0_134.1_13664.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_134.1_13664.t1 atgggccttctaacagatggtaacaagctaaggcttttcctaaacattacaaatggagtactgatagttataggctgtgt atgtgtgggcgtgggaggatggcttgcagctgacaaggtcttcatctcagacattgtaggaaatgatcttttttcttccg ctacctacatcatcatattctccggatgtgtgttgattatcattagcttcgtgggctgtcttggagtacatatgaaaaat ggaccaatcctcagtatttatattgtgtgtttgatcctgatattccttttgatgtttgctgctggtatagttgcggctct gttccagggacagttggagtcaactacaaaaacaaacatgcaaagtgccattaaaaataattatgggaataatatagcat caagttcagagaataaaagaataacagagtcatgggacttttttcaaaatcgtttacaatgctgtgcagtagaggattat gggtacactctgtacagacaatctcattggtttagccagaccaatcctaatgtacgcatacaagtgacaggagtacagtc agtatacaaccagaatccctcgtacaatactggtactaactacaacacaaactacggctaccacaaccctgatcacgtgg tacaatttatcccagaatcctgctgtaagaaccagggcacgttcaaaacaggagactggaaaagattctgtcagagtaac aagtttggtcccccggccatcgtaggacaaagacataataattatgccatgaactttaagggatgttatacggcagctaa agagtttgtaaaggacagcggcgccatcattatagcattaggcttcctgtttgcagcacttttagttttagccctcgtcc tgtctattgcgttttggttgttactaaggaaaaccccacgacatcatcctgttgcccgtaacgattaccctgttgccaag gagatgcagaacttggtggccacagactccaaaaacaacaaaaatgtcaattaa |
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Protein
| Protein ID | pfu_aug2.0_134.1_13664.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_134.1_13664.t1 MGLLTDGNKLRLFLNITNGVLIVIGCVCVGVGGWLAADKVFISDIVGNDLFSSATYIIIFSGCVLIIISFVGCLGVHMKN GPILSIYIVCLILIFLLMFAAGIVAALFQGQLESTTKTNMQSAIKNNYGNNIASSSENKRITESWDFFQNRLQCCAVEDY GYTLYRQSHWFSQTNPNVRIQVTGVQSVYNQNPSYNTGTNYNTNYGYHNPDHVVQFIPESCCKNQGTFKTGDWKRFCQSN KFGPPAIVGQRHNNYAMNFKGCYTAAKEFVKDSGAIIIALGFLFAALLVLALVLSIAFWLLLRKTPRHHPVARNDYPVAK EMQNLVATDSKNNKNVN |
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