Gene
| Gene Model ID | pfu_aug2.0_134.1_13668 |
|---|---|
| Locus | scaffold134.1 : 432238 ... 462232 : - |
| To GenomeBrowser | scaffold134.1:432238..462232 |
| Genes list of scaffold | scaffold134.1 |
| Synonym | pfu_aug1.0_1581.1_51339 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_134.1_13668.t1 | 3 | 1 | Exo_endo_phos | 709 | 777 | 9.7e-10 | 38.7 | 4.2e-08 | 0.00062 | 19.7 |
| pfu_aug2.0_134.1_13668.t1 | 3 | 2 | Exo_endo_phos | 920 | 961 | 9.7e-10 | 38.7 | 0.015 | 220.0 | 1.5 |
| pfu_aug2.0_134.1_13668.t1 | 3 | 3 | Exo_endo_phos | 1028 | 1095 | 9.7e-10 | 38.7 | 3.7e-06 | 0.055 | 13.3 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_134.1_13668.t1 | gi|676465061|ref|XP_009057122.1| | hypothetical protein LOTGIDRAFT_233228 [Lottia gigantea] | 0.0 |
| pfu_aug2.0_134.1_13668.t1 | gi|524898203|ref|XP_005105554.1| | PREDICTED: retinitis pigmentosa 1-like 1 protein-like [Aplysia californica] | 0.0 |
Transcript
| Transcript ID | pfu_aug2.0_134.1_13668.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_134.1_13668.t1 atgccacgaggaaaggggaagaacagtaagagtcctgcgcctgcagcaaggaaaagctccagggcagctccggagccaag ccctgctaaacctaccagaggttctgtatcccagagcccagctcctaaacgagggaggaaagccagcccgagtcccaccc ctactggcagacaagctagcagaggaaggaaaggaaaaaccgctactaaggaaccctcacctgaaccggagaagaaaacc aaaaccagaggccgaagtcatcaaggtcaaggtaaaggtgatggtaatgaagacgctggaaaagggagagtgacaagagc tgttgtacaggaagcagagacccccaaacaaggcagaggacgttcagcaggacgcaatgctcaacctccagtgacccctg aaccgacacccagaagtagttcaagacaaaaaacacaaacacctaaggcaaaaactcctagtaaagctcagacaccaaag ggtaaagccacacctgcaaagaagggtagaggaaggggtagaggcaaaaaagcccaggaagaagttgaagcagaagatga agaagaggaggaagaagaagaagaggttgaggaggaagaagaagaagaggttgagaaagcaacaccaaaacaaagaggac gaggaaggggtgcaggaaaggcaaccccaaagtcaattggtaaagctgcagccaaaaatactcctaaaaagtcacctgcc aaaaagccagcagcaagtccttctccggcaagaaaaggacggcgggcaaaagctgccgaggaggagtctgaggaaagtga gcctcaagtagtattaaagaaggtagattctcctgcaaagaaaagtcccaagtcaagtcctaaggctggtcgtaaagcat caaagtcaccagctaaatctccaagcaagactccaactaaatctcccagaggtagaggcagaaaatctgcagacaaggag agtgaggaaacagcagctgcagaggctgaggacaaggaagaagaagctgcccctgctgaagaggagaaagaaagcaagga tgagacagatgcaacagctgatgttgcagaggaaaaagctgacaatgaggatgcaaaaatggaagatgcagaagaagaac ctttagaagcgcaagaggaggaaagtaagaaggaagaagaggaagaagctccagaggaagaaagcaaggaggaggaagag gagatggaagaggatgtggcacctgcagaggagtcaaaaccagttgaagaagaaattgtagaagaaccctccgctcagac taatggtgaagaacctccagatcatagtcctgccaaaaaacgtaaactagatgatgatgatgatgtgacagaagatatgt ctgttaaaaaagcaagagtagaagaggaagaaactagtccagtagaaaatggggctgaaactgaggaagctattgaaaat gatgtggaagcaatggagcaagaaacagcagatacaaaggaaagcgaggaagacaaagattatgtcatcattaacaagga tgaggttccaccacctgatagtcaagaagttctggaaagtgctccaaaggaggttacaccagccgtggaagagccttctg aagaaaacatggaagaagagaatgaagcagctgcagaggaagaggaagttcaggaggagggagcagaagaaacatcgcaa acagtaatagaagatgttacagaagagcaatctgaagttttgaaagaaccagctgtagagacgatggtcatggaaaatga agttgttgctacagaagcagaacaggatgaagttctagaatcagaacctgtaatgccagagtcagcacctgtagttgcag aatcagaacttgtagcacaagaggaaccgactgtagctaatagctgtccagaggaacctgtagttcaacaacaggaccag gtagcagcagtgcagtctcagccagaagtagttgataacgtagcagaaagtgttacaaactgtgtaatccccaatcaaat agatcaatcacaggcagctattcctaaacccccatcaactacagattgggtggtcaataggaaattcattaataatccag gatttaatatagagacaagtgacccttcgaaacattttagtgttgctagctataatattttagcccagtgccatcttgat agaaatgactattcatttactgaggattgttacttggcattggattatcgacacgaaaaactgatgaaggaaatgaaatt cctcaatgctgatatcgtgtgtatgcaagaagtgggaccatcttactttgaatccaaattgttacctgcaatgagagaga ttggttatgaaggcataatgatgaagaggacggatgattattatgatgaaggggaagccagcttttacaaaactagtcgc tttactccaatacaaacacagacatactccctgaagcagcttgctatagaaaatgagttacttggtcagggtctagatga aggtttggaggattcactggccaaatacctagaccgtcccgatatactgatcatcacgcagctacgatgtaataacacac agaatatcatcaccataggaaacatccatgttcactggggaaagatggaagtccctgatgtacaatgtgttcagaaaacg tcattggttaatcatttatggagggcatttcaacatacatcatctggtttaaagagtgcatatgcagtagctgagaaatc ggagccagtggtgacatcgtacaacagagtaatgaaagcagcagtggattatatattttatagtgcaaattgtatggaca atgtaggcgttttacaggtgtcgccagaatcggctatttgtgctacaggtggaatcccagacagtgtcttcccatcggat cacgtctcagtcatggcaaagttctccttcaactccttatcacatattcctatatctaatgtcggtagaggaaaaggagt caaaattgagttacttggccagggtctagatgaaggtttggaggattcactggccaaatacctagaccgtcctgatatac tgatcatcacgcagctacgatgtaataacacacagaatatcatcaccataggaaacatccatgttcactggggaaagatg gaagtccctgatgtacaatgtgttcagattgccagtgctataaaggaggtagtaaccaaagcagggagtgatggtcatcc acacatactgtgcggagattttaactcggaggtgaccagtccagggtaccagctgtgtacggagggttacctttcggacg ccatgatccagtatctacagaacatggaaaacctgcagctatccgacggaaatgcgcgtagccagatgtacgcaagtacg cagatgcctccacatcgttttgcaaaaaagaaagaataa |
|
Protein
| Protein ID | pfu_aug2.0_134.1_13668.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_134.1_13668.t1 MPRGKGKNSKSPAPAARKSSRAAPEPSPAKPTRGSVSQSPAPKRGRKASPSPTPTGRQASRGRKGKTATKEPSPEPEKKT KTRGRSHQGQGKGDGNEDAGKGRVTRAVVQEAETPKQGRGRSAGRNAQPPVTPEPTPRSSSRQKTQTPKAKTPSKAQTPK GKATPAKKGRGRGRGKKAQEEVEAEDEEEEEEEEEVEEEEEEEVEKATPKQRGRGRGAGKATPKSIGKAAAKNTPKKSPA KKPAASPSPARKGRRAKAAEEESEESEPQVVLKKVDSPAKKSPKSSPKAGRKASKSPAKSPSKTPTKSPRGRGRKSADKE SEETAAAEAEDKEEEAAPAEEEKESKDETDATADVAEEKADNEDAKMEDAEEEPLEAQEEESKKEEEEEAPEEESKEEEE EMEEDVAPAEESKPVEEEIVEEPSAQTNGEEPPDHSPAKKRKLDDDDDVTEDMSVKKARVEEEETSPVENGAETEEAIEN DVEAMEQETADTKESEEDKDYVIINKDEVPPPDSQEVLESAPKEVTPAVEEPSEENMEEENEAAAEEEEVQEEGAEETSQ TVIEDVTEEQSEVLKEPAVETMVMENEVVATEAEQDEVLESEPVMPESAPVVAESELVAQEEPTVANSCPEEPVVQQQDQ VAAVQSQPEVVDNVAESVTNCVIPNQIDQSQAAIPKPPSTTDWVVNRKFINNPGFNIETSDPSKHFSVASYNILAQCHLD RNDYSFTEDCYLALDYRHEKLMKEMKFLNADIVCMQEVGPSYFESKLLPAMREIGYEGIMMKRTDDYYDEGEASFYKTSR FTPIQTQTYSLKQLAIENELLGQGLDEGLEDSLAKYLDRPDILIITQLRCNNTQNIITIGNIHVHWGKMEVPDVQCVQKT SLVNHLWRAFQHTSSGLKSAYAVAEKSEPVVTSYNRVMKAAVDYIFYSANCMDNVGVLQVSPESAICATGGIPDSVFPSD HVSVMAKFSFNSLSHIPISNVGRGKGVKIELLGQGLDEGLEDSLAKYLDRPDILIITQLRCNNTQNIITIGNIHVHWGKM EVPDVQCVQIASAIKEVVTKAGSDGHPHILCGDFNSEVTSPGYQLCTEGYLSDAMIQYLQNMENLQLSDGNARSQMYAST QMPPHRFAKKKE |
|