Gene
| Gene Model ID | pfu_aug2.0_1340.1_01554 |
|---|---|
| Locus | scaffold1340.1 : 28296 ... 38337 : + |
| To GenomeBrowser | scaffold1340.1:28296..38337 |
| Genes list of scaffold | scaffold1340.1 |
| Synonym | pfu_aug1.0_551.1_36581 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_1340.1_01554.t1 | 3 | 1 | SSF | 23 | 63 | 0.0 | 332.1 | 1.4e-12 | 1.0e-08 | 34.2 |
| pfu_aug2.0_1340.1_01554.t1 | 3 | 2 | SSF | 62 | 133 | 0.0 | 332.1 | 7.2e-24 | 5.4e-20 | 71.4 |
| pfu_aug2.0_1340.1_01554.t1 | 3 | 3 | SSF | 134 | 407 | 0.0 | 332.1 | 0.0 | 0.0 | 239.0 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_1340.1_01554.t1 | gi|701304126|ref|XP_010012714.1| | PREDICTED: sodium/myo-inositol cotransporter 2 [Nestor notabilis] | 0.0 |
| pfu_aug2.0_1340.1_01554.t1 | gi|541984889|ref|XP_005444144.1| | PREDICTED: sodium/myo-inositol cotransporter 2 [Falco cherrug] | 0.0 |
| pfu_aug2.0_1340.1_01554.t1 | gi|529418427|ref|XP_005229092.1| | PREDICTED: sodium/myo-inositol cotransporter 2 [Falco peregrinus] | 0.0 |
| pfu_aug2.0_1340.1_01554.t1 | gi|700359372|ref|XP_009924134.1| | PREDICTED: sodium/myo-inositol cotransporter 2 [Haliaeetus albicilla] | 0.0 |
| pfu_aug2.0_1340.1_01554.t1 | gi|686615792|ref|XP_009284772.1| | PREDICTED: sodium/myo-inositol cotransporter 2 [Aptenodytes forsteri] | 0.0 |
Transcript
| Transcript ID | pfu_aug2.0_1340.1_01554.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_1340.1_01554.t1 atgaaggcgggattagacaattgggtggacattgcagtggtcatcatttatttcatattagtacttattgttggacttct gatcggtgcttccttattcgcgagcaatattgggagtgaacatttcatcggattggcaggaagtggtgccgccagtggga ttgcagtcgttgcgtttgaatggggtatgttcaccattcccgagtacctgagtaagagatttggaggatatagactaagg atgtacctcagtcttctggccttattcatatacattgtcaccaaaatatcggttgacatatatgctggtgcagtgtttgt acagcaagcattaggctggaacacctatatttctatagtggccctgctggcagtaacggcagtgtatactgttgtgggct ttgtaaaagttggaggaatcaccgggttacaatcgaagtattttgaggctgtgcccgagactcatctgatcagcaacgca tcaaacgtcaaccacacagcgagcacatgtggcttgccaagggcggatgcgtttcacatattacgtgacccagtgaactc tgacctaccttggccaggtgtgctaattaggtcaacctttgtatctacatggtactggtgcgctgatcaggtaattgtac aacgtgctctggcagcgaaagatattggccatgcgcgtggtgctacattaatggcgggatatttaaaattcctgccactg ttccttatcataatgccaggaatgataagtagagtactttatccagattcagtggcatgcgccgacgcagagacatgtat ggaggtttgtgaaaatccagtgggatgttcaaatgtggcatatccaagacttatcctaggcttggctcctacgggcttgc gcggactcatgatggcggttatgatggctgcactgatgagctctttgacttccatatttaacagtgctgccaccttgttt actatggatctatggcggaaaattaggaagcaatcgtctgaaagggagctccttatcgttggaaaagtgttcgttttgat acttgtgggaatcagtgtagcatggatccctcttatacaggcagcacagcaaggacagctcttcttatacatccaggcag ttactgggtaccttgtaccgcctatatgttccgttttcctcttggcagtgtttgttcctagggttaacgaacagggagca ttttggggaatggttattggtcagattattggattgactcgtatgattttggacttcgtttatcccgcgccaaaatgcgg cgagccagacacgagaccattggtggtggccaaggtccacttcacatactttgcatctatggttttgataataacagcag cggttgtactggtgataagctaccttaccgatgtaccaagcagggaacaggtatatgggctaacattttggaccatagat ccagttggtccaagaccaaagagaaaaagagtactacgtgttcaagttaaagatgtgcttccagaagactatattgaggc ggaattgattgcagaaaatgaaaatgagaataaaaacatcaatgtcaacaaaaacactggaaatgcgaatctcgaacagc agtactcggaaataaatggggaggaacaagatcaaggtaagacaaatgttacggaacaaacatttgaggaaaaagtatca aaacgtcgttccgaattggacgaggcttttcataagattctgaaaaagccggagacagttccgaagactagtctctatga cgaaatagacataaggaaagaggacaatgaaacaaactgggaaatgaaagagtctcctgtaataatgcgtcagaaacaac cagagcgtattccatacgattctgatgagaaccgtgttctagaagtgtacgggataggaaaacggggttctgataaggct gaggatttggaactggaggatcttaaaccatcacaggaaactgttgaacaaagaaataaaataattcgtgtgaaacgtga gttctttccaagacaactagtatattccaaacactgtgcacatcaacaaaaagtgtctccgcgaaatcgtacactcacca caccgcagcgagcacaaatattaattccagtcacctga |
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Protein
| Protein ID | pfu_aug2.0_1340.1_01554.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_1340.1_01554.t1 MKAGLDNWVDIAVVIIYFILVLIVGLLIGASLFASNIGSEHFIGLAGSGAASGIAVVAFEWGMFTIPEYLSKRFGGYRLR MYLSLLALFIYIVTKISVDIYAGAVFVQQALGWNTYISIVALLAVTAVYTVVGFVKVGGITGLQSKYFEAVPETHLISNA SNVNHTASTCGLPRADAFHILRDPVNSDLPWPGVLIRSTFVSTWYWCADQVIVQRALAAKDIGHARGATLMAGYLKFLPL FLIIMPGMISRVLYPDSVACADAETCMEVCENPVGCSNVAYPRLILGLAPTGLRGLMMAVMMAALMSSLTSIFNSAATLF TMDLWRKIRKQSSERELLIVGKVFVLILVGISVAWIPLIQAAQQGQLFLYIQAVTGYLVPPICSVFLLAVFVPRVNEQGA FWGMVIGQIIGLTRMILDFVYPAPKCGEPDTRPLVVAKVHFTYFASMVLIITAAVVLVISYLTDVPSREQVYGLTFWTID PVGPRPKRKRVLRVQVKDVLPEDYIEAELIAENENENKNINVNKNTGNANLEQQYSEINGEEQDQGKTNVTEQTFEEKVS KRRSELDEAFHKILKKPETVPKTSLYDEIDIRKEDNETNWEMKESPVIMRQKQPERIPYDSDENRVLEVYGIGKRGSDKA EDLELEDLKPSQETVEQRNKIIRVKREFFPRQLVYSKHCAHQQKVSPRNRTLTTPQRAQILIPVT |
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