Gene
| Gene Model ID | pfu_aug2.0_1349.1_31628 |
|---|---|
| Locus | scaffold1349.1 : 19746 ... 32772 : + |
| To GenomeBrowser | scaffold1349.1:19746..32772 |
| Genes list of scaffold | scaffold1349.1 |
| Synonym | NA |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_1349.1_31628.t1 | 1 | 1 | Fringe | 8 | 90 | 8.8e-20 | 70.9 | 7.0e-24 | 1.0e-19 | 70.7 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_1349.1_31628.t1 | gi|742113113|ref|XP_010872878.1| | PREDICTED: beta-1,3-N-acetylglucosaminyltransferase lunatic fringe [Esox lucius] | 4.0e-13 |
| pfu_aug2.0_1349.1_31628.t1 | gi|657759081|ref|XP_008314826.1| | PREDICTED: beta-1,3-N-acetylglucosaminyltransferase lunatic fringe-like [Cynoglossus semilaevis] | 4.0e-13 |
| pfu_aug2.0_1349.1_31628.t1 | gi|505847895|ref|XP_004617408.1| | PREDICTED: beta-1,3-N-acetylglucosaminyltransferase lunatic fringe [Sorex araneus] | 5.0e-13 |
| pfu_aug2.0_1349.1_31628.t1 | gi|499036830|ref|XP_004569078.1| | 6.0e-13 | |
| pfu_aug2.0_1349.1_31628.t1 | gi|548436372|ref|XP_005744596.1| | PREDICTED: beta-1,3-N-acetylglucosaminyltransferase lunatic fringe-like isoform X2 [Pundamilia nyererei] | 7.0e-13 |
Transcript
| Transcript ID | pfu_aug2.0_1349.1_31628.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_1349.1_31628.t1 atgaatgacgtatttttgagacatgtgaagatttggtttcataatcttggagctgggatttgctttagtaggggattgat aaacaaaatggaacctataattagaaacaatggatttgcaaaactggcaccttccatcggactgcacgacgatcttgttt taggatttataataaatcacaagctgagaattccttttaccgaaagttatttgttccattctcagtgggaaaatatgtca atgattcgagacttagagaaacaggttagtaaaagggatgcacgacaaagacaaataattccaggagtgaaaaaagatag tgatgccataaaattctga |
|
Protein
| Protein ID | pfu_aug2.0_1349.1_31628.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_1349.1_31628.t1 MNDVFLRHVKIWFHNLGAGICFSRGLINKMEPIIRNNGFAKLAPSIGLHDDLVLGFIINHKLRIPFTESYLFHSQWENMS MIRDLEKQVSKRDARQRQIIPGVKKDSDAIKF |
|