Gene
| Gene Model ID | pfu_aug2.0_1349.1_31629 |
|---|---|
| Locus | scaffold1349.1 : 65614 ... 72135 : - |
| To GenomeBrowser | scaffold1349.1:65614..72135 |
| Genes list of scaffold | scaffold1349.1 |
| Synonym | pfu_aug1.0_400.1_65402 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_1349.1_31629.t1 | 3 | 1 | WD40 | 24 | 47 | 2.2e-07 | 30.4 | 0.075 | 560.0 | 0.6 |
| pfu_aug2.0_1349.1_31629.t1 | 3 | 2 | WD40 | 81 | 99 | 2.2e-07 | 30.4 | 2.0e-05 | 0.15 | 11.9 |
| pfu_aug2.0_1349.1_31629.t1 | 3 | 3 | WD40 | 116 | 141 | 2.2e-07 | 30.4 | 1.7e-06 | 0.013 | 15.3 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_1349.1_31629.t1 | gi|676441068|ref|XP_009049377.1| | hypothetical protein LOTGIDRAFT_186470 [Lottia gigantea] | 0.0 |
| pfu_aug2.0_1349.1_31629.t1 | gi|543736175|ref|XP_005509044.1| | PREDICTED: DDB1- and CUL4-associated factor 8, partial [Columba livia] | 0.0 |
| pfu_aug2.0_1349.1_31629.t1 | gi|585199961|ref|XP_006750936.1| | PREDICTED: DDB1- and CUL4-associated factor 8-like [Leptonychotes weddellii] | 0.0 |
| pfu_aug2.0_1349.1_31629.t1 | gi|694844650|ref|XP_009463256.1| | PREDICTED: DDB1- and CUL4-associated factor 8 [Nipponia nippon] | 0.0 |
| pfu_aug2.0_1349.1_31629.t1 | gi|327287436|ref|XP_003228435.1| | PREDICTED: DDB1- and CUL4-associated factor 8 [Anolis carolinensis] | 0.0 |
Transcript
| Transcript ID | pfu_aug2.0_1349.1_31629.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_1349.1_31629.t1 atgtacagaaagagttctggattggttaagaaatactgtcctcataaactggttgatagcagttccaaggccaatgttac ctgtgcagtttacagctataatgggacagagatcctgggatcctacaatgatgacgatatttactcgttcagtaatttag actcggacggcgccgagtacatacacaaatatggaggacatcgtaacaatgctacagtgaagggtgtgaactactatgga cctaggagtgagtttgtggtcagtggcagtgactgtggacatatttatttatgggacagagaaacggaggacatagtaca gttcttacctggagacgagggaggagtgatcaatgtacttgagcctcacccatttgcccctatactggcaacaagtggac ttgatcatgatgtcaaagtatgggtgcctactgaagaggaacccacccagctcaaaaaccttaaaaaggttagtaaataa |
|
Protein
| Protein ID | pfu_aug2.0_1349.1_31629.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_1349.1_31629.t1 MYRKSSGLVKKYCPHKLVDSSSKANVTCAVYSYNGTEILGSYNDDDIYSFSNLDSDGAEYIHKYGGHRNNATVKGVNYYG PRSEFVVSGSDCGHIYLWDRETEDIVQFLPGDEGGVINVLEPHPFAPILATSGLDHDVKVWVPTEEEPTQLKNLKKVSK |
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