Gene
| Gene Model ID | pfu_aug2.0_1349.1_31630 |
|---|---|
| Locus | scaffold1349.1 : 74800 ... 85105 : - |
| To GenomeBrowser | scaffold1349.1:74800..85105 |
| Genes list of scaffold | scaffold1349.1 |
| Synonym | pfu_aug1.0_400.1_65402 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_1349.1_31630.t1 | 2 | 1 | WD40 | 437 | 470 | 2.6e-10 | 39.7 | 2.8e-08 | 0.00021 | 21.0 |
| pfu_aug2.0_1349.1_31630.t1 | 2 | 2 | WD40 | 482 | 513 | 2.6e-10 | 39.7 | 1.0e-06 | 0.0076 | 16.0 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_1349.1_31630.t1 | gi|524872570|ref|XP_005093046.1| | PREDICTED: DDB1- and CUL4-associated factor 8-like isoform X1 [Aplysia californica] | 0.0 |
| pfu_aug2.0_1349.1_31630.t1 | gi|260831112|ref|XP_002610503.1| | hypothetical protein BRAFLDRAFT_65670 [Branchiostoma floridae] | 0.0 |
| pfu_aug2.0_1349.1_31630.t1 | gi|585653915|ref|XP_006815197.1| | PREDICTED: DDB1- and CUL4-associated factor 8-like [Saccoglossus kowalevskii] | 0.0 |
| pfu_aug2.0_1349.1_31630.t1 | gi|585183843|ref|XP_006743500.1| | PREDICTED: DDB1- and CUL4-associated factor 8-like [Leptonychotes weddellii] | 0.0 |
Transcript
| Transcript ID | pfu_aug2.0_1349.1_31630.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_1349.1_31630.t1 atggcagagaaaggaaagcttgagaactgtgtgtttggcggcgaggaggacaaaatcaacatgatcaagaatcaggcaga tagttctctgaatgaatctggaatcgcaatggagaaacagacggacatctcatacgacagcatggtgacgaaaaataaaa acactgatttgcggaagagcaccacacagaatgcacaagatacagacaaagacaaatgtatgggcattgagttcaataaa gaatctaacgttacagtgaatattgtgcacgaggaatcgggaatatttgtagataatgataatcttgatgtaacgagtgt tgatgctggtcaggttagccaagattctgagtctgattccgcattaggattacggaaaaataacagcgatctttcagtgg aaggggaaaaatctccttcgacaggcaagagttgttcagacttagacatcagtgaatgtacgtgtgacacacaaacggac agtggtgtaacttcaggcacaaactctgctagcgattcgtcaaactaccgcaagactttaaaagttttggatgccaaaaa tggcatgcaaacagataatgcattaaaatataaaacaaaaaaccaagaaatgacgggaaattatgaggagtcagagtcag atgtcaaagtattaaacgataacgacaaaaatcatgttcaggtctgtgataatgataaagactctcacgagagcaaagaa ttacttgccgacataaactgtgataaagcagaggaatgtgacattagcgattgtatgcctacttcactcgacacagagga cagcgatcctattggtagttacgatgttgccatggcaacggtgagtaattcagaaggtgagcagaattccgagtcaatta aaatcaagaaaaacatacgcataagaggaaaacgtaaatatcgtataccgcgcattaaatcagacagtgacactgaaagt gataccacagaaaatgttgacatgaatacaggtgaaaatctcgagagagaaaacggtcaggacgaattaagtgatgactc tgatttttcggctgatcattttgacgatattggtgatgaagatgatgatgacaatgaagagtcagaaaagaagaagtcag aggagagtaaaagtgattcagaagaagaagaagaaagcaatagatctactaaatacaaacacacctggaaagctctgtat gatttaaggagcagggaatatgggagcaataacaggactcccccagcagtattcagggagaaagtacatggcagtgtaca gatggttcagagattcaacctacagtataaaatggagtaccacgagggctgtgttaacgccttacacttcaatagaatag gcaccttgttagccagtggctcagatgatttaaacattgtattatggaactggatcagaaatcgtccggccttagtttac gacagtggccataggagtaacgtctttcaggccaagttcatgccatttagtggcgattgtcatgttgtaagttgtgccag ggacggacagataagattaggggagctgtcattaactggtgtgtgtaaaggaaccaagaagcttgcccagcataaaggtg ctgcccataaggtattgagataa |
|
Protein
| Protein ID | pfu_aug2.0_1349.1_31630.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_1349.1_31630.t1 MAEKGKLENCVFGGEEDKINMIKNQADSSLNESGIAMEKQTDISYDSMVTKNKNTDLRKSTTQNAQDTDKDKCMGIEFNK ESNVTVNIVHEESGIFVDNDNLDVTSVDAGQVSQDSESDSALGLRKNNSDLSVEGEKSPSTGKSCSDLDISECTCDTQTD SGVTSGTNSASDSSNYRKTLKVLDAKNGMQTDNALKYKTKNQEMTGNYEESESDVKVLNDNDKNHVQVCDNDKDSHESKE LLADINCDKAEECDISDCMPTSLDTEDSDPIGSYDVAMATVSNSEGEQNSESIKIKKNIRIRGKRKYRIPRIKSDSDTES DTTENVDMNTGENLERENGQDELSDDSDFSADHFDDIGDEDDDDNEESEKKKSEESKSDSEEEEESNRSTKYKHTWKALY DLRSREYGSNNRTPPAVFREKVHGSVQMVQRFNLQYKMEYHEGCVNALHFNRIGTLLASGSDDLNIVLWNWIRNRPALVY DSGHRSNVFQAKFMPFSGDCHVVSCARDGQIRLGELSLTGVCKGTKKLAQHKGAAHKVLR |
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