Gene
| Gene Model ID | pfu_aug2.0_1359.1_31636 |
|---|---|
| Locus | scaffold1359.1 : 30216 ... 49942 : + |
| To GenomeBrowser | scaffold1359.1:30216..49942 |
| Genes list of scaffold | scaffold1359.1 |
| Synonym | NA |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_1359.1_31636.t1 | 1 | 1 | G8 | 7 | 120 | 2.8e-25 | 88.5 | 4.2e-29 | 6.2e-25 | 87.4 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_1359.1_31636.t1 | gi|432875166|ref|XP_004072707.1| | PREDICTED: transmembrane protein 2 isoform X1 [Oryzias latipes] | 0.0 |
| pfu_aug2.0_1359.1_31636.t1 | gi|327263447|ref|XP_003216531.1| | PREDICTED: transmembrane protein 2 [Anolis carolinensis] | 0.0 |
Transcript
| Transcript ID | pfu_aug2.0_1359.1_31636.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_1359.1_31636.t1 atgaatacatctttttccaaacagaaacctcaacccaaccacaatgtcattataaacaagaaagtaattctggacacaag tccccctgagtttggaggacttaccataggtccacatggtcatctagtatggagtccagcaggtgactacagcctcaagg tcaaatacatcagggtacaaggaataatggagatcggatcggaaacttgcaaatttaccgcaaaagcagaaataacactt actggtataagaggaagctacatcatcccgggtttcggtgagaagtttattggtgtagagaggggtggaactttggaaat acatggtgcaaacaagctatcctggacaaaactaagcaggactgtaccgaaagttcagcagagtcagttctaccatgaac acagggggtcaaacaatacaaataatgactggatggagggtattggaatgtatgtcatcaacccctcacatagacacatt gacagttataagaactatgaacttagtggagacccatcgcaggtgcactggaacgaaagaggagtcaaagagttcccaac agacataaaaggtgttccaaatggtcgtctcatactagtagcagtaacttatacactgaaaagagatgaaaagtctcatc acttggatgcagtatacgatgcatatgaagaagctctattcggccatgtgactcatcagagcaagttgcgcacgctcaaa catagggacgcatacgtagcctatgcaatcaaaggaaaccatacatccgtggtggaagaggtcatacgagtagacaccag tactggaagacacaaggcagaacttgtctatacagactggatccatcatgtgaaatacaccatcagtagtcaagtagacc ttcattacagatggcagtcctaccctaactttaaatggatcaacacaaaatatgcttatcccataataagtgttattgaa gatgtttcctcttggaagccaggtgatacggttttctttgcatccactgactataaccttaaccaagctgaacgtgcaac tctggtaccatgtcatcgatgtaactctcaccagtttcaagtggatcacgagtttcaacacagtcacttcggaaagattg tagatcgtgtagatatgaggggtgaagtgggacttctgaccagaaacatcaagatcaaaggtgaaatgcaagaccactgt cctccttccaatggtaattgtggtacatgtccaagtggacaagaaaattgtggcaaatacaagtacgacacctttggtgg tcatttaaaaaatactggaatttggttcattttcccaagagaacccacaggtccctccactggcatgggatttatgaaat gggccaatcaaacagccatattggaaactgacaacaacgttgctcattcatcttttataacgggattcaatatggagagt atactagaggataatgggaaggtgtgctgtaataatggttacaatcctaaggaaactcctggtgatccaaaatcagagtc caaagaagtagtaattaacagacttaccagttacaaaaaccatttgagaaacgtatggatacgcggtggaaaaatacaca tgaagcacgcttcgttgtctgacagttacactggaatcacgatggcaaaatcgtcgcctggggaacagttcatgagtaac agtatcatacttggagagtctacaaacaagggggaaggtgatggggtatggagggatgaccttcaaaaaacattgtacta tcaaaggtcactagcgttaccatgggatccgggatacccagttcgtttcggtatctgtatgccaaaacacgctacattcg atttgtattcatacgctcctcactggagaccgacgttagacaaatggtcacgtgtacatgatttgacggccctggataat agtgatggtgggtcctacatgtacgacgagaacagaggattgctgtttgtaaagtttgtcagcaataatcctcgtggaga ggggataaccacttcctgtaacggaacatgtcccatgctgcaggtgacgataaagtcaggggatagatcacacggggact gcacggcggccgcatacccgacctacactagacatcccgctacattctcggttagtatatcataa |
|
Protein
| Protein ID | pfu_aug2.0_1359.1_31636.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_1359.1_31636.t1 MNTSFSKQKPQPNHNVIINKKVILDTSPPEFGGLTIGPHGHLVWSPAGDYSLKVKYIRVQGIMEIGSETCKFTAKAEITL TGIRGSYIIPGFGEKFIGVERGGTLEIHGANKLSWTKLSRTVPKVQQSQFYHEHRGSNNTNNDWMEGIGMYVINPSHRHI DSYKNYELSGDPSQVHWNERGVKEFPTDIKGVPNGRLILVAVTYTLKRDEKSHHLDAVYDAYEEALFGHVTHQSKLRTLK HRDAYVAYAIKGNHTSVVEEVIRVDTSTGRHKAELVYTDWIHHVKYTISSQVDLHYRWQSYPNFKWINTKYAYPIISVIE DVSSWKPGDTVFFASTDYNLNQAERATLVPCHRCNSHQFQVDHEFQHSHFGKIVDRVDMRGEVGLLTRNIKIKGEMQDHC PPSNGNCGTCPSGQENCGKYKYDTFGGHLKNTGIWFIFPREPTGPSTGMGFMKWANQTAILETDNNVAHSSFITGFNMES ILEDNGKVCCNNGYNPKETPGDPKSESKEVVINRLTSYKNHLRNVWIRGGKIHMKHASLSDSYTGITMAKSSPGEQFMSN SIILGESTNKGEGDGVWRDDLQKTLYYQRSLALPWDPGYPVRFGICMPKHATFDLYSYAPHWRPTLDKWSRVHDLTALDN SDGGSYMYDENRGLLFVKFVSNNPRGEGITTSCNGTCPMLQVTIKSGDRSHGDCTAAAYPTYTRHPATFSVSIS |
|