Gene
| Gene Model ID | pfu_aug2.0_1359.1_31637 |
|---|---|
| Locus | scaffold1359.1 : 50417 ... 60295 : - |
| To GenomeBrowser | scaffold1359.1:50417..60295 |
| Genes list of scaffold | scaffold1359.1 |
| Synonym | pfu_aug1.0_25021.1_26211 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_1359.1_31637.t1 | 1 | 1 | PRP38 | 8 | 177 | 0.0 | 222.1 | 0.0 | 0.0 | 221.9 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_1359.1_31637.t1 | gi|676464225|ref|XP_009056854.1| | hypothetical protein LOTGIDRAFT_66003, partial [Lottia gigantea] | 0.0 |
| pfu_aug2.0_1359.1_31637.t1 | gi|241695324|ref|XP_002413055.1| | pre-mRNA-splicing factor 38A, putative [Ixodes scapularis] | 0.0 |
| pfu_aug2.0_1359.1_31637.t1 | gi|158302472|ref|XP_322016.4| | AGAP001145-PA [Anopheles gambiae str. PEST] | 0.0 |
| pfu_aug2.0_1359.1_31637.t1 | gi|665797605|ref|XP_008546638.1| | PREDICTED: pre-mRNA-splicing factor 38A [Microplitis demolitor] | 0.0 |
| pfu_aug2.0_1359.1_31637.t1 | gi|345498292|ref|XP_001606816.2| | PREDICTED: pre-mRNA-splicing factor 38A [Nasonia vitripennis] | 0.0 |
Transcript
| Transcript ID | pfu_aug2.0_1359.1_31637.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_1359.1_31637.t1 atggcgaaccgaacggtaaaagacgctcactctgtgaaagggacaaatcctcaatatcttgtggagaaaattatcagaac tcgaatttatgaatgcagatattggaaagaggaatgttttgcacttacggccgagctattggttgacaaggccatggaac ttaaatacattggaggtgtatttggagggaacatcaagccaactccatttctttgtcttgtattgaaaatgcttcagata cagccagaaaaggacattgtggttgaatttataaggaatgaaaatttcaagtatgtgcgcgctcttggtgctgtatacat gaggctaacaggaactacgctggactgcttcaaatatctggagcccctgtattatgactatcgaaaacttaaacagcaga atagagaaggagctttccatttgattcacatggatgaattcattgatgaacttctaagagaagagagagtatgtgatata atattgccaagaatacagaagcggcatgttttagaggaaaacaatcagctcgagcctcgagtcagtcttctagatgacga tgttgaggaaatggacacctctgatgatgaagccatggatagaagtccgacaccagaaaaaaggcattcaagtccctctc gacaccattctagcagagatagacggaaaagatcaagatcgcgggacagagacaaaagacacagatctcctacagataaa agacgcaaagatgatgatgataggtga |
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Protein
| Protein ID | pfu_aug2.0_1359.1_31637.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_1359.1_31637.t1 MANRTVKDAHSVKGTNPQYLVEKIIRTRIYECRYWKEECFALTAELLVDKAMELKYIGGVFGGNIKPTPFLCLVLKMLQI QPEKDIVVEFIRNENFKYVRALGAVYMRLTGTTLDCFKYLEPLYYDYRKLKQQNREGAFHLIHMDEFIDELLREERVCDI ILPRIQKRHVLEENNQLEPRVSLLDDDVEEMDTSDDEAMDRSPTPEKRHSSPSRHHSSRDRRKRSRSRDRDKRHRSPTDK RRKDDDDR |
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