Gene
| Gene Model ID | pfu_aug2.0_1359.1_31639 |
|---|---|
| Locus | scaffold1359.1 : 77466 ... 83396 : + |
| To GenomeBrowser | scaffold1359.1:77466..83396 |
| Genes list of scaffold | scaffold1359.1 |
| Synonym | pfu_aug1.0_17538.1_47106 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_1359.1_31639.t1 | 2 | 1 | Cdc6_C | 45 | 53 | 3.7e-13 | 48.9 | 0.44 | 6500.0 | -3.1 |
| pfu_aug2.0_1359.1_31639.t1 | 2 | 2 | Cdc6_C | 102 | 182 | 3.7e-13 | 48.9 | 5.1e-17 | 7.6e-13 | 47.9 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_1359.1_31639.t1 | gi|260795335|ref|XP_002592661.1| | hypothetical protein BRAFLDRAFT_124128 [Branchiostoma floridae] | 0.0 |
| pfu_aug2.0_1359.1_31639.t1 | gi|291236785|ref|XP_002738319.1| | PREDICTED: origin recognition complex subunit 1-like [Saccoglossus kowalevskii] | 0.0 |
| pfu_aug2.0_1359.1_31639.t1 | gi|524866695|ref|XP_005090166.1| | PREDICTED: serine/arginine repetitive matrix protein 2-like [Aplysia californica] | 0.0 |
| pfu_aug2.0_1359.1_31639.t1 | gi|60648171|gb|AAH90562.1| | XORC1 protein [Xenopus laevis] | 0.0 |
Transcript
| Transcript ID | pfu_aug2.0_1359.1_31639.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_1359.1_31639.t1 atgactttccagccttacacctttaaacagctacaggaaattgttgtgtccagaatgaagggactgaatgcgtttgagga ggatgccatccagctggcagccaggaaagttgctgccgtgtcaggagacgctcgcagggcactggatatatgccgcaggg ctaccgagataacagaaatcatgtcacctaggaagtccaatgcattagtgggaatgactcatatagacaaagctttgcaa gaaatgttttcctcaccaaaagttgtagctataagaactgcgtcagagcaagagaagactttcctgcgagccatcgtagc agagttccagaggtcaggactagaagaggccgaattccacaaaatcttcacacaacatgtagcattgtgtcgtattgatg gtatgaaggtgccctctacatcagagttagcagggatatgctcgcgtctgggaagtatacgactgttattggtagaacat ggtcgaaatgacttacatatgagagtgcgcctcaatgtcagccaagatgatgtactgtatgcacttaaagaaaaaagtgg tgtttag |
|
Protein
| Protein ID | pfu_aug2.0_1359.1_31639.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_1359.1_31639.t1 MTFQPYTFKQLQEIVVSRMKGLNAFEEDAIQLAARKVAAVSGDARRALDICRRATEITEIMSPRKSNALVGMTHIDKALQ EMFSSPKVVAIRTASEQEKTFLRAIVAEFQRSGLEEAEFHKIFTQHVALCRIDGMKVPSTSELAGICSRLGSIRLLLVEH GRNDLHMRVRLNVSQDDVLYALKEKSGV |
|