Gene
| Gene Model ID | pfu_aug2.0_136.1_20293 |
|---|---|
| Locus | scaffold136.1 : 6226 ... 20884 : + |
| To GenomeBrowser | scaffold136.1:6226..20884 |
| Genes list of scaffold | scaffold136.1 |
| Synonym | pfu_aug1.0_3889.1_44815 |
Manual annotation
Annotation by Blast2GO
| Annotation | GO |
|---|---|
| dnaj homolog subfamily a member 1 | GO:0000151 GO:0001664 GO:0005524 GO:0005829 GO:0006457 GO:0007283 GO:0009408 GO:0016020 GO:0030317 GO:0030521 GO:0030544 GO:0031397 GO:0031625 GO:0043065 GO:0043066 GO:0043508 GO:0046872 GO:0050750 GO:0051082 GO:0051087 GO:0051223 GO:0070062 GO:0070585 GO:1901998 |
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_136.1_20293.t1 | 2 | 1 | DnaJ | 7 | 65 | 1.9e-35 | 120.4 | 3.8e-31 | 7.1e-28 | 96.1 |
| pfu_aug2.0_136.1_20293.t1 | 2 | 1 | DnaJ_CXXCXGXG | 127 | 139 | 2.5e-14 | 53.0 | 0.51 | 950.0 | -0.1 |
| pfu_aug2.0_136.1_20293.t1 | 2 | 2 | DnaJ | 145 | 166 | 1.9e-35 | 120.4 | 1.2e-08 | 2.3e-05 | 24.0 |
| pfu_aug2.0_136.1_20293.t1 | 2 | 2 | DnaJ_CXXCXGXG | 236 | 302 | 2.5e-14 | 53.0 | 1.3e-17 | 2.5e-14 | 53.0 |
| pfu_aug2.0_136.1_20293.t1 | 2 | 1 | CTDII | 308 | 346 | 1.4e-23 | 82.5 | 0.00033 | 0.62 | 10.0 |
| pfu_aug2.0_136.1_20293.t1 | 2 | 2 | CTDII | 359 | 435 | 1.4e-23 | 82.5 | 2.9e-23 | 5.5e-20 | 71.0 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_136.1_20293.t1 | gi|291228607|ref|XP_002734268.1| | PREDICTED: dnaJ homolog subfamily A member 1-like isoform X1 [Saccoglossus kowalevskii] | 0.0 |
| pfu_aug2.0_136.1_20293.t1 | gi|260792591|ref|XP_002591298.1| | hypothetical protein BRAFLDRAFT_264103 [Branchiostoma floridae] | 0.0 |
| pfu_aug2.0_136.1_20293.t1 | gi|530579230|ref|XP_005283531.1| | PREDICTED: dnaJ homolog subfamily A member 1 [Chrysemys picta bellii] | 0.0 |
| pfu_aug2.0_136.1_20293.t1 | gi|591366247|ref|XP_007057982.1| | PREDICTED: dnaJ homolog subfamily A member 1 [Chelonia mydas] | 0.0 |
| pfu_aug2.0_136.1_20293.t1 | gi|558124367|ref|XP_006114888.1| | PREDICTED: dnaJ homolog subfamily A member 1 [Pelodiscus sinensis] | 0.0 |
Transcript
| Transcript ID | pfu_aug2.0_136.1_20293.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_136.1_20293.t1 atggtgaaggagacgggatattacgatatactaggagtgaaacctaattctacgccagaggaaatcaagaaagcatacag aaagcttgcactcaaatttcatcctgataaaaatcctgatgacccagaaaagttcaagctaataagccatgcatacgaga cactgtctgatcccaagaaaagagaaatttacgacgaaggtggagaggaagccatcaaaggaggaggttctaacactgaa ttccataatccattcgacatattcaatatgttctttggaacaggaggctcgagaaagcagagctcaagaaaagtaaagag tgtggtacatcaacttagtgttagccttgaagatctgtacaatggaacgacgagaaagttagctgtgaagaaaaatgtta tctgctcaaaatgtgatgtgttgtacagctcaagtttcaagctaataagccatgcatacgagacactgtctgatcccaag aaaagagaaatttacgacgaaggtggagaggaagccatcaaaggaggaggttctaacactgaattccataatccattcga catattcaatatgttctttggaacaggaggctcgagaaagcagagctcaagaaaagtaaagagtgtggtacatcaactta gtgttagccttgaagatctgtacaatggaacgacgagaaagttagctgtgaagaaaaatgttatctgctcaaaatgtgat gggaaaggaggaaagcaaggtgcggtagaaaaatgcaaaacctgtaaaggtacaggagtgcaggtacatatacgacgttt aggtccaggaatggtacagcagatgcaggcagtgtgctcagattgtagaggagaaggggagagaatagatcctaaactta gatgtaaaacatgtgaagggaaaaaagtcttacaagaaagaaaaatccttgaggtccatatagataaaggtatgaaagat ggtgaaaacatcaaatttcatggtgaaggggaccaggaaccaggattagaaccaggggatattgttatagttttagatga aaaaagacatgacatctacactcgtaaaggaattgatctcttaatgaatatggaaataccattagtggaagcactgtgtg gattccgcaagacaatcaaaacaatggacaacaggacgctagtcataactgctcatccaggtgaagtgataaaagacaat gaaataaaatgcataatgaacgaaggcatgccaactcacagaaatccatttgaaaaagggaggctcatcatacactttca agtgaaatttccggaaactttggcactcgataaagtaaaagccatagagaaactgttgcctgcacgacctgaaggtatga ttccggacgatgctgaggaacacgaccttgtggaatatgaccccagcgagaggaaacatcgaggtcatcaagatgcttac atggaggacgatgatgagggtcattttggaccccacggacagagagtccagtgcgcaaatcaatga |
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Protein
| Protein ID | pfu_aug2.0_136.1_20293.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_136.1_20293.t1 MVKETGYYDILGVKPNSTPEEIKKAYRKLALKFHPDKNPDDPEKFKLISHAYETLSDPKKREIYDEGGEEAIKGGGSNTE FHNPFDIFNMFFGTGGSRKQSSRKVKSVVHQLSVSLEDLYNGTTRKLAVKKNVICSKCDVLYSSSFKLISHAYETLSDPK KREIYDEGGEEAIKGGGSNTEFHNPFDIFNMFFGTGGSRKQSSRKVKSVVHQLSVSLEDLYNGTTRKLAVKKNVICSKCD GKGGKQGAVEKCKTCKGTGVQVHIRRLGPGMVQQMQAVCSDCRGEGERIDPKLRCKTCEGKKVLQERKILEVHIDKGMKD GENIKFHGEGDQEPGLEPGDIVIVLDEKRHDIYTRKGIDLLMNMEIPLVEALCGFRKTIKTMDNRTLVITAHPGEVIKDN EIKCIMNEGMPTHRNPFEKGRLIIHFQVKFPETLALDKVKAIEKLLPARPEGMIPDDAEEHDLVEYDPSERKHRGHQDAY MEDDDEGHFGPHGQRVQCANQ |
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