Gene
| Gene Model ID | pfu_aug2.0_136.1_20294 |
|---|---|
| Locus | scaffold136.1 : 24686 ... 28430 : + |
| To GenomeBrowser | scaffold136.1:24686..28430 |
| Genes list of scaffold | scaffold136.1 |
| Synonym | pfu_aug1.0_4044.1_44848 |
Manual annotation
Annotation by Blast2GO
| Annotation | GO |
|---|---|
| dnaj homolog subfamily a member 1 | GO:0000151 GO:0001664 GO:0005524 GO:0005829 GO:0006457 GO:0007283 GO:0009408 GO:0016020 GO:0030317 GO:0030521 GO:0030544 GO:0031397 GO:0031625 GO:0043065 GO:0043066 GO:0043508 GO:0046872 GO:0050750 GO:0051082 GO:0051087 GO:0051223 GO:0070062 GO:0070585 GO:1901998 |
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_136.1_20294.t1 | 1 | 1 | DnaJ | 7 | 65 | 1.3e-27 | 95.3 | 7.6e-31 | 2.2e-27 | 94.5 |
| pfu_aug2.0_136.1_20294.t1 | 3 | 1 | CTDII | 112 | 127 | 1.6e-08 | 34.3 | 2.4 | 7000.0 | -3.0 |
| pfu_aug2.0_136.1_20294.t1 | 1 | 1 | DnaJ_CXXCXGXG | 136 | 202 | 5.4e-14 | 52.0 | 2.9e-17 | 8.7e-14 | 51.3 |
| pfu_aug2.0_136.1_20294.t1 | 3 | 2 | CTDII | 208 | 246 | 1.6e-08 | 34.3 | 0.00011 | 0.34 | 10.8 |
| pfu_aug2.0_136.1_20294.t1 | 3 | 3 | CTDII | 259 | 290 | 1.6e-08 | 34.3 | 5.1e-08 | 0.00015 | 21.5 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_136.1_20294.t1 | gi|564730486|ref|NP_001274228.1| | DnaJ (Hsp40) homolog, subfamily A, member 1 [Alligator mississippiensis] | 0.0 |
| pfu_aug2.0_136.1_20294.t1 | gi|675886850|ref|XP_009028927.1| | hypothetical protein HELRODRAFT_95902 [Helobdella robusta] | 0.0 |
Transcript
| Transcript ID | pfu_aug2.0_136.1_20294.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_136.1_20294.t1 atggtgaaagaaacagcttattatgacattttgggcgtaaagccgtcggctcaacctgatgagattaagaaagcgtacag aaagcttgctctgaaattccacccagacaagaacccagaggatcctgaaaagttcaaacaaatcagccaggcatatgagg tgctgtcagatccaaagaaaagagacctctatgatgaaggaggagaggaggccatcaaaggaggaggaggctcctctcaa ttccataatccatttgatgtgtttgacatgttctttgggggtggggcatcatcaaggagacgaggaccaaccaagggtag aaatgctgttcatcaaatgaaagtgagccttgaagatatatacaacggagcaacaagaaaactagcactgcagaaaaatg tcatatgtcaaaagtgtgaaggtaggggaggtaaggaaggggcagtagagaagtgtgtgacgtgtcgaggtacaggggtc caaataaagatgcagcagcttggaccaatgatgatgcagcaaatccagtcagtgtgctctgattgccgtggacaaggcga gagaattaacgcaaaaaacaggtgtaaaacatgtcagggaaggaaggtcatcaaagaaagcaaaatattagaagtgcatg ttgataaaggtatgtcagacggggagaatattcgattccacggagagggggaccaggagccgggagtagaaccaggagat gtagtggtcgtgttagacgaagaacaacatgacgtatacagacgtaggggcatagatctactgatgcagatggagttaca gctagtggaagctctttgtggattccgtaaaacaattacaacattagacaagaggactttaattatatcaactttaccag agtattag |
|
Protein
| Protein ID | pfu_aug2.0_136.1_20294.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_136.1_20294.t1 MVKETAYYDILGVKPSAQPDEIKKAYRKLALKFHPDKNPEDPEKFKQISQAYEVLSDPKKRDLYDEGGEEAIKGGGGSSQ FHNPFDVFDMFFGGGASSRRRGPTKGRNAVHQMKVSLEDIYNGATRKLALQKNVICQKCEGRGGKEGAVEKCVTCRGTGV QIKMQQLGPMMMQQIQSVCSDCRGQGERINAKNRCKTCQGRKVIKESKILEVHVDKGMSDGENIRFHGEGDQEPGVEPGD VVVVLDEEQHDVYRRRGIDLLMQMELQLVEALCGFRKTITTLDKRTLIISTLPEY |
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