Gene
| Gene Model ID | pfu_aug2.0_136.1_20297 |
|---|---|
| Locus | scaffold136.1 : 84896 ... 97264 : + |
| To GenomeBrowser | scaffold136.1:84896..97264 |
| Genes list of scaffold | scaffold136.1 |
| Synonym | pfu_aug1.0_99680.1_42386 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_136.1_20297.t1 | 1 | 1 | Nse4-Nse3_bdg | 90 | 133 | 5.2e-08 | 32.6 | 1.7e-11 | 1.2e-07 | 31.4 |
| pfu_aug2.0_136.1_20297.t1 | 2 | 1 | Nse4_C | 195 | 215 | 4.5e-13 | 49.0 | 0.45 | 3300.0 | -1.9 |
| pfu_aug2.0_136.1_20297.t1 | 2 | 2 | Nse4_C | 237 | 301 | 4.5e-13 | 49.0 | 1.7e-16 | 1.3e-12 | 47.5 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_136.1_20297.t1 | gi|514752813|ref|XP_005021205.1| | PREDICTED: non-structural maintenance of chromosomes element 4 homolog A [Anas platyrhynchos] | 8.40779e-45 |
| pfu_aug2.0_136.1_20297.t1 | gi|118093115|ref|XP_421797.2| | PREDICTED: non-structural maintenance of chromosomes element 4 homolog A isoform X2 [Gallus gallus] | 9.80909e-45 |
Transcript
| Transcript ID | pfu_aug2.0_136.1_20297.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_136.1_20297.t1 atggctgacagtcggaaaaagaaatcgaaagaaaatcaaaatgagggatctgatgtcgaagatggaggcgacgatgaaat catttattccaggaatcaagatacgaaagagagactggaagtcaggcgtggatacagaaccttgttggaggacttgcaaa agaataaagaggaatacataaacccacagtcagaaagcctgaatgaagccttacaaggagccaatgaacttaatactaaa gtgaaagcaccgagagaaggagccctggactctgctacaatattgatgatatcaaatttggggagacagaaggtggaggc attaaaaacagatttcatcaaatttgaaccagtggaatttgccgaaaaattgaaaacagtagtacgagggggagtgaccc agcaggagagagatgctcctatcacgtcacaggaatggatcaggcttggcgaggcagtgcagaaattctttaagaaatca ccttctttccattacatgtctggagcttttgaaccaggtgaacgccaacagagaccaaataagccgaagcatagacaagt cgataaaaatcagaatgaaaaagctacagtggtggacaaaatgaagaactttgaagaggacaataagaatgaggctacca ctgcagaagtagagagagtgctagaaaccctgaaaaagtgctataggcttagtgaaaatctcccattacaagatgggcta gcaaaaatcagtttagatgatgatcagctacctgtcatagagcctgtaaaagaaaaggaagaagatcagcaagcaagcag gaagaaaaaatccaatcaccagactgttatatctataactccagaagaatggaaggatttagtgtctgcgtataaaatca gcaagcctctaataccaacaaggaagactgatgtatcggaaccagatggcaagagaagcaaaaagagttga |
|
Protein
| Protein ID | pfu_aug2.0_136.1_20297.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_136.1_20297.t1 MADSRKKKSKENQNEGSDVEDGGDDEIIYSRNQDTKERLEVRRGYRTLLEDLQKNKEEYINPQSESLNEALQGANELNTK VKAPREGALDSATILMISNLGRQKVEALKTDFIKFEPVEFAEKLKTVVRGGVTQQERDAPITSQEWIRLGEAVQKFFKKS PSFHYMSGAFEPGERQQRPNKPKHRQVDKNQNEKATVVDKMKNFEEDNKNEATTAEVERVLETLKKCYRLSENLPLQDGL AKISLDDDQLPVIEPVKEKEEDQQASRKKKSNHQTVISITPEEWKDLVSAYKISKPLIPTRKTDVSEPDGKRSKKS |
|