Gene
| Gene Model ID | pfu_aug2.0_136.1_20298 |
|---|---|
| Locus | scaffold136.1 : 100848 ... 122255 : - |
| To GenomeBrowser | scaffold136.1:100848..122255 |
| Genes list of scaffold | scaffold136.1 |
| Synonym | pfu_aug1.0_8737.1_45927 |
Manual annotation
Annotation by Blast2GO
| Annotation | GO |
|---|---|
| telomeric repeat binding factor 2 | GO:0000723 GO:0005488 GO:0044428 GO:0048519 GO:0060255 |
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_136.1_20298.t1 | 1 | 1 | TRF | 33 | 197 | 2.5e-06 | 27.0 | 8.6e-10 | 6.4e-06 | 25.6 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_136.1_20298.t1 | gi|676471049|ref|XP_009059053.1| | hypothetical protein LOTGIDRAFT_164310 [Lottia gigantea] | 2.0e-29 |
| pfu_aug2.0_136.1_20298.t1 | gi|221139718|ref|NP_001137398.1| | telomeric repeat-binding factor 2 [Xenopus (Silurana) tropicalis] | 7.0e-13 |
| pfu_aug2.0_136.1_20298.t1 | gi|148236301|ref|NP_001089166.1| | telomeric repeat binding factor 2 [Xenopus laevis] | 3.0e-12 |
| pfu_aug2.0_136.1_20298.t1 | gi|184191025|gb|ACC76744.1| | telomeric repeat binding factor 2 [Xenopus laevis] | 3.0e-12 |
| pfu_aug2.0_136.1_20298.t1 | gi|729761768|ref|XP_010577842.1| | PREDICTED: telomeric repeat-binding factor 2 isoform X2 [Haliaeetus leucocephalus] | 7.0e-12 |
Transcript
| Transcript ID | pfu_aug2.0_136.1_20298.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_136.1_20298.t1 atgaaaatgattgctgcaagttctgcacaggattctgcaactacgaagattaatgcatggatattagactatgctttcca catagtatggaaagagtttctatctgcacgaacagtggacagtaactccaatagggaacttattcaatgggtgatggacc agccatttgagaccaatactcacagggacctcaaatacagtatcttactcctgttatgccgcttagctgacggaaagaat ttcaaaactcgttaccaagacgaaacaaaagtaaccgttttagaagacgctctccagcagtataacacatttcatgaagt tctgccaaaagatctcgtcaatgacagccttgccgttcaaggatctatgaaaacacaggccgtgctagtttgctgcaggg caggtgattttgctgcggcagatgaagtttttgggcgagtctatccagcaaaagccaagaaagaagacaaggaaattaga gaaaggcttggaaatctgatcaagtcccgaaacaaatcagcaaaattcatacagaaagagagttacgagtcatttgtgga aagcatgtcacagttctttgaaaaaattgttgcaaagtttcagcctcccttttttactcagctagcattaaatgagctaa atggaacctcatcaccacaaaaaatatcacacctgtcacatgcaactcagacggacaatgtatcatctacaaagaggtca gcagcggaagtcatgaatgaagtattgtcacctaaacgtatcaggattactaatgggcaatctggaagtccttctatgcg aaggagtccgagaactaggagccattcatctagaggaaatgagcaggtagagaaactgaaagaaggttcagccaactcca ggtcaaagtcatatgccaatgctgaaaagattcacatatcaagactggagaagtaccaagcatgcaaaagaaatggtata aaagaattaacatcagaagaaggggagaaactcaaaacaaggatttcgaccacattggcaaaaacaaaccaaaacaagaa ttccagagctgttgagcacagtggagagagtgaggaaacagctactgagggtgatgatgattcggatattgagggagaaa gcatttgtaaacattggaactgcatgcgcagtagattatttctgttccatttcctaaagcgcagagacataatagtctcc tctcagatactttgtctggctgtctgtaattttcagttttccagacttttctaccatgtaaaaagatatggagctgaaat tcaatgcattgcttag |
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Protein
| Protein ID | pfu_aug2.0_136.1_20298.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_136.1_20298.t1 MKMIAASSAQDSATTKINAWILDYAFHIVWKEFLSARTVDSNSNRELIQWVMDQPFETNTHRDLKYSILLLLCRLADGKN FKTRYQDETKVTVLEDALQQYNTFHEVLPKDLVNDSLAVQGSMKTQAVLVCCRAGDFAAADEVFGRVYPAKAKKEDKEIR ERLGNLIKSRNKSAKFIQKESYESFVESMSQFFEKIVAKFQPPFFTQLALNELNGTSSPQKISHLSHATQTDNVSSTKRS AAEVMNEVLSPKRIRITNGQSGSPSMRRSPRTRSHSSRGNEQVEKLKEGSANSRSKSYANAEKIHISRLEKYQACKRNGI KELTSEEGEKLKTRISTTLAKTNQNKNSRAVEHSGESEETATEGDDDSDIEGESICKHWNCMRSRLFLFHFLKRRDIIVS SQILCLAVCNFQFSRLFYHVKRYGAEIQCIA |
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