Gene
| Gene Model ID | pfu_aug2.0_136.1_20301 |
|---|---|
| Locus | scaffold136.1 : 162126 ... 181694 : + |
| To GenomeBrowser | scaffold136.1:162126..181694 |
| Genes list of scaffold | scaffold136.1 |
| Synonym | pfu_aug1.0_21909.1_04185 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_136.1_20301.t1 | 1 | 1 | T-box | 211 | 383 | 0.0 | 205.4 | 0.0 | 0.0 | 204.9 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_136.1_20301.t1 | gi|512930232|ref|XP_004932015.1| | PREDICTED: T-related protein [Bombyx mori] | 0.0 |
| pfu_aug2.0_136.1_20301.t1 | gi|645006489|ref|XP_008204809.1| | PREDICTED: brachyury protein [Nasonia vitripennis] | 0.0 |
| pfu_aug2.0_136.1_20301.t1 | gi|665819767|ref|XP_008558762.1| | PREDICTED: LOW QUALITY PROTEIN: T-related protein [Microplitis demolitor] | 0.0 |
| pfu_aug2.0_136.1_20301.t1 | gi|755965080|ref|XP_011305051.1| | PREDICTED: brachyury protein homolog isoform X1 [Fopius arisanus] | 0.0 |
| pfu_aug2.0_136.1_20301.t1 | gi|676445804|ref|XP_009050872.1| | hypothetical protein LOTGIDRAFT_76774, partial [Lottia gigantea] | 0.0 |
Transcript
| Transcript ID | pfu_aug2.0_136.1_20301.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_136.1_20301.t1 atggatgagcctctagatctcagtttaaagacgcaaaccacgaaacaggaacacaaagtcaattttgaaacagccgggaa cccattggaacaaattatcaacagaattgatacaagcaagaaagaattcagcgaaatagccagaatcccaacgacgttac gaaatgacaacgacgtgtccgtcggtctgtctgtaataaagcaagtaaagtccaatgaagaggatgactgcctggaaaat ttgcggcaagatttttcaaacagaaacattccaacaaacattatcgattgttttaacgatacagccaacggttcaagaga agaggacaacggtaacgatgacctggaacggtatgataacgttaagacagaggtaaaatgtaacagagatgacgtatttc aagatgaaatcaacaagaacaagtttgatagcgttgcgatagtgccagaatcttacagcatgggtagtttttgtaatgga attgaaaaggaccaggatgattcagtgattcagcgaaaaccacagccagcaatctgcaaaattccttgcccgaacggcga aagacaggcgattgacgtagatgacgccacgcccattgagatgacagtaaacgatgttacgttatgcgtggttgattctg aactgtggaggtcattcaagcagatacagaatgagatgatcattaacagagggggaagaagaatgttcccgtacatcgcc gtcacgttccgaggtctccgacctaccgccttatatgacgtcatattggagattgtgtcagcggatcaaatgcgttataa gtacgtcaacgatgcttgggtccccgtgggtcgggctgaaacattccacaccaatgctcccttcgttcaccacgaatgcc catgctatggagaagacttgatgagaaaaagtctgtcgttctcgcgtgtcaagttgaccaacagcaaagagtttgcagac ggcaagatgcttttacagtccatgtgtaaatacaccatgagaatcagtgtagttgaaagagagaaaaggcaaagaatcta tccctttctcctgaaggaaactacgttcatagcagtaacagcataccaaaattcaaaaattactaacctcaaaattcaga acaatccttttgctaaagcattcagaaaatccagacaaaagagacagtctttggaaaatccagcctctgatgacgaggag attgtcccaagcaaagcaaagttaaaaactgtctcaacaagcgacacttcaccctccaacagacgttatagttttgatgg tgggtatgaatctctgtgtaaattacatgtagctttacagaaagcctag |
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Protein
| Protein ID | pfu_aug2.0_136.1_20301.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_136.1_20301.t1 MDEPLDLSLKTQTTKQEHKVNFETAGNPLEQIINRIDTSKKEFSEIARIPTTLRNDNDVSVGLSVIKQVKSNEEDDCLEN LRQDFSNRNIPTNIIDCFNDTANGSREEDNGNDDLERYDNVKTEVKCNRDDVFQDEINKNKFDSVAIVPESYSMGSFCNG IEKDQDDSVIQRKPQPAICKIPCPNGERQAIDVDDATPIEMTVNDVTLCVVDSELWRSFKQIQNEMIINRGGRRMFPYIA VTFRGLRPTALYDVILEIVSADQMRYKYVNDAWVPVGRAETFHTNAPFVHHECPCYGEDLMRKSLSFSRVKLTNSKEFAD GKMLLQSMCKYTMRISVVEREKRQRIYPFLLKETTFIAVTAYQNSKITNLKIQNNPFAKAFRKSRQKRQSLENPASDDEE IVPSKAKLKTVSTSDTSPSNRRYSFDGGYESLCKLHVALQKA |
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