Gene
| Gene Model ID | pfu_aug2.0_136.1_20305 |
|---|---|
| Locus | scaffold136.1 : 215142 ... 219215 : - |
| To GenomeBrowser | scaffold136.1:215142..219215 |
| Genes list of scaffold | scaffold136.1 |
| Synonym | pfu_aug1.0_12151.1_61001 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_136.1_20305.t1 | 1 | 1 | DDE_Tnp_4 | 179 | 256 | 2.8e-06 | 27.0 | 7.0e-10 | 5.2e-06 | 26.1 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_136.1_20305.t1 | gi|390354722|ref|XP_003728393.1| | 1.0e-24 | |
| pfu_aug2.0_136.1_20305.t1 | gi|390360559|ref|XP_003729721.1| | 2.0e-24 | |
| pfu_aug2.0_136.1_20305.t1 | gi|390363457|ref|XP_788048.3| | 6.0e-24 | |
| pfu_aug2.0_136.1_20305.t1 | gi|390362527|ref|XP_003730179.1| | PREDICTED: uncharacterized protein LOC100892188 [Strongylocentrotus purpuratus] | 6.0e-24 |
Transcript
| Transcript ID | pfu_aug2.0_136.1_20305.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_136.1_20305.t1 atgagttcaaagacgaaacgatatcttgtccaacaacccctggagaaaaatatccgacgaattctatcgacgatcgaatg tgtggtgtttggaggaaaggtcttccagcaaattgtcggaattcaaatggggaccaattgtgccccactccttgccgaca ttttcctttactcgtacgaagctgaattcattcaatctttagtatctgaagggaaaagatacttagcttctgacttcaac ttcacttacagatacatagacgatgtcttgtccaccaataatccaaaattcgcggattatctgagcagtatctatccttc agagtttgaagtcaaagaaactacagagacaaataattcagcatcctatttggacataaagttgtcctacgacactgatg gtcacatgaacacttcactctatgacaaacgtgacgacttcaatttcagcattacaaactttccctttctgagtagcacc tgggcacctggtctcactgccataccgggagttcgcttcttttcatatggtggagttcttttaggacttgtagatgcaga ttataaatttctatgggtagactgtggtgggaacggggatatgtctgatgctcaaatctacaatgcttcagagcttaaat atcacttgcaggaaggaacaatcggccttccaaatcctgagccattgcctaatgatgacgacaaggatatgccttacttc atattaggtgacgacgcatttggcctcagaacatatctcatgattaacatatctcatgattaccatacacatacaaagat acatgactcgtga |
|
Protein
| Protein ID | pfu_aug2.0_136.1_20305.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_136.1_20305.t1 MSSKTKRYLVQQPLEKNIRRILSTIECVVFGGKVFQQIVGIQMGTNCAPLLADIFLYSYEAEFIQSLVSEGKRYLASDFN FTYRYIDDVLSTNNPKFADYLSSIYPSEFEVKETTETNNSASYLDIKLSYDTDGHMNTSLYDKRDDFNFSITNFPFLSST WAPGLTAIPGVRFFSYGGVLLGLVDADYKFLWVDCGGNGDMSDAQIYNASELKYHLQEGTIGLPNPEPLPNDDDKDMPYF ILGDDAFGLRTYLMINISHDYHTHTKIHDS |
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