Gene
Gene Model ID | pfu_aug2.0_136.1_20305 |
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Locus | scaffold136.1 : 215142 ... 219215 : - |
To GenomeBrowser | scaffold136.1:215142..219215 |
Genes list of scaffold | scaffold136.1 |
Synonym | pfu_aug1.0_12151.1_61001 |
Manual annotation
Hmmer Search for Pfam
query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
---|---|---|---|---|---|---|---|---|---|---|
pfu_aug2.0_136.1_20305.t1 | 1 | 1 | DDE_Tnp_4 | 179 | 256 | 2.8e-06 | 27.0 | 7.0e-10 | 5.2e-06 | 26.1 |
Blast Hit to nr / sp
query | Subject ID | Subject Name | evalue |
---|---|---|---|
pfu_aug2.0_136.1_20305.t1 | gi|390354722|ref|XP_003728393.1| | 1.0e-24 | |
pfu_aug2.0_136.1_20305.t1 | gi|390360559|ref|XP_003729721.1| | 2.0e-24 | |
pfu_aug2.0_136.1_20305.t1 | gi|390363457|ref|XP_788048.3| | 6.0e-24 | |
pfu_aug2.0_136.1_20305.t1 | gi|390362527|ref|XP_003730179.1| | PREDICTED: uncharacterized protein LOC100892188 [Strongylocentrotus purpuratus] | 6.0e-24 |
Transcript
Transcript ID | pfu_aug2.0_136.1_20305.t1 |
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Definition | - |
>pfu_aug2.0_136.1_20305.t1 atgagttcaaagacgaaacgatatcttgtccaacaacccctggagaaaaatatccgacgaattctatcgacgatcgaatg tgtggtgtttggaggaaaggtcttccagcaaattgtcggaattcaaatggggaccaattgtgccccactccttgccgaca ttttcctttactcgtacgaagctgaattcattcaatctttagtatctgaagggaaaagatacttagcttctgacttcaac ttcacttacagatacatagacgatgtcttgtccaccaataatccaaaattcgcggattatctgagcagtatctatccttc agagtttgaagtcaaagaaactacagagacaaataattcagcatcctatttggacataaagttgtcctacgacactgatg gtcacatgaacacttcactctatgacaaacgtgacgacttcaatttcagcattacaaactttccctttctgagtagcacc tgggcacctggtctcactgccataccgggagttcgcttcttttcatatggtggagttcttttaggacttgtagatgcaga ttataaatttctatgggtagactgtggtgggaacggggatatgtctgatgctcaaatctacaatgcttcagagcttaaat atcacttgcaggaaggaacaatcggccttccaaatcctgagccattgcctaatgatgacgacaaggatatgccttacttc atattaggtgacgacgcatttggcctcagaacatatctcatgattaacatatctcatgattaccatacacatacaaagat acatgactcgtga |
Protein
Protein ID | pfu_aug2.0_136.1_20305.t1 |
---|---|
Definition | - |
>pfu_aug2.0_136.1_20305.t1 MSSKTKRYLVQQPLEKNIRRILSTIECVVFGGKVFQQIVGIQMGTNCAPLLADIFLYSYEAEFIQSLVSEGKRYLASDFN FTYRYIDDVLSTNNPKFADYLSSIYPSEFEVKETTETNNSASYLDIKLSYDTDGHMNTSLYDKRDDFNFSITNFPFLSST WAPGLTAIPGVRFFSYGGVLLGLVDADYKFLWVDCGGNGDMSDAQIYNASELKYHLQEGTIGLPNPEPLPNDDDKDMPYF ILGDDAFGLRTYLMINISHDYHTHTKIHDS |