Gene
| Gene Model ID | pfu_aug2.0_136.1_20308 |
|---|---|
| Locus | scaffold136.1 : 251736 ... 263832 : + |
| To GenomeBrowser | scaffold136.1:251736..263832 |
| Genes list of scaffold | scaffold136.1 |
| Synonym | pfu_aug1.0_12.1_36216 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_136.1_20308.t1 | 2 | 1 | PLAT | 21 | 56 | 1.9e-18 | 66.8 | 0.35 | 1300.0 | -0.3 |
| pfu_aug2.0_136.1_20308.t1 | 1 | 1 | GPS | 273 | 305 | 6.3e-07 | 29.4 | 4.4e-10 | 1.6e-06 | 28.0 |
| pfu_aug2.0_136.1_20308.t1 | 2 | 2 | PLAT | 385 | 501 | 1.9e-18 | 66.8 | 4.8e-21 | 1.8e-17 | 63.7 |
| pfu_aug2.0_136.1_20308.t1 | 3 | 1 | PKD_channel | 549 | 595 | 0.0 | 260.2 | 0.99 | 3700.0 | -4.1 |
| pfu_aug2.0_136.1_20308.t1 | 3 | 2 | PKD_channel | 678 | 712 | 0.0 | 260.2 | 0.38 | 1400.0 | -2.7 |
| pfu_aug2.0_136.1_20308.t1 | 3 | 1 | Ion_trans | 696 | 696 | 6.6e-10 | 38.5 | 0.49 | 1800.0 | -2.1 |
| pfu_aug2.0_136.1_20308.t1 | 3 | 2 | Ion_trans | 790 | 821 | 6.6e-10 | 38.5 | 0.031 | 120.0 | 1.8 |
| pfu_aug2.0_136.1_20308.t1 | 3 | 3 | PKD_channel | 839 | 1283 | 0.0 | 260.2 | 0.0 | 0.0 | 260.2 |
| pfu_aug2.0_136.1_20308.t1 | 3 | 3 | Ion_trans | 1072 | 1273 | 6.6e-10 | 38.5 | 1.8e-13 | 6.6e-10 | 38.5 |
Transcript
| Transcript ID | pfu_aug2.0_136.1_20308.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_136.1_20308.t1 atgcgcttgtacaaggccgaggaatctgttccaaatgtactgaatgccatagaatcatcgtacaatgtcaaactgcagac gacagaagttggtgccggaccttccaagattatcagaccgaatctagagctcagtgttgagaaagtgacaaaggaaatct tacaaaacagaacagaaactccaataaaaggaatcaagctttccctggaccaaaacgataccgaggctatacaaggaaca ctcgatataaagcaaacagtgtttgataagccacctacaatatacggagacggcatagcatctttaacatcaagagcctt acagttagaactcagcaacaagagtatcataccgaacttatcgtttgaaaataagcaaactgcctatgcaaaccggtttg aaccacaaatgacggcaggggacccagaacaaatgttttacctgaattttgacgtcaaaaacgatgacgatgttgcgtta gtgtacgtggagcctgacaattttgatatctacaacaggaatacttggacgttgtatgagctatactatcgtgcagcgac atttccaaagacctcaatcttcagcttctataaagagttttctataagagactacacagaaggactcggattcaaagtca tgattcctcctatgaagaaaggccaacatttcctgggattcaaggctctgtccgtcccagaaccctctaagcgaaggaaa cgccggtctgtggccgttgacaatacaacaacagtggctccaagcaacactaccaatcaacttataaatgttaacgttag tgtcgtccttgtcacaaccggatgtagatcctggaacgaggctgagaaaaagtgggtttcagatggatgcacggttttgc ctatgtcaacgccaaacgagaccgtatgccgctgtccacgagccgcagggaacttatttgcaacgacgttctacgtgcct cctaatacaatagactttgctacagtgttcagcaagtttgatgcatctaatgccgctatatatggcacgtgtattgccct gatcgtggtgtggataattgctgtcgtactgttacggcgacaagacctcaaagatcaagaaaggtggtccacttactttt tgtgtgacagtgatgctactgatgagtatttctatatggtcagtgttcacactgggctgagaaagggagctgggacccag tccagagtgaactttgtgctgtctggagaggacgatgacagtggagtgcggatactaagtgacggtgtcagaaagggttt tccgactgggagtgtacgttcatttttcatgggcaccaagtatcccctaggcgaccttacttacctaaggatctggcatg ataacagtggagagggaggggaacaatcatggtacctaaacaaagtgacggtagatgatccacagagacatgccaggtat accttcatttgtgaaagatggttggccgtggaacgtgacgacggacaagttgaaagagtgctaccagtctgcggccgtga gaacctattacaattcaatacgcttttcttccaacatgcacagttcaatataacagagaatcacctatggctgtcattgt taatccgacctcagagaagcagcttcactcgagtccagcgtgcttcctgcatactcgccttgttattcctaaccatgatc gccaacgccatgttcttccggtcctcaagtgaagaagtcaatccgaacgaggttcagatcggtatattgcggttctctat gagcatcctgtttatatcaatcattggtatccttatcaccacaccgccaatcttgatagtgacaatcatattcaaaaagt gcaaaccaaaaccagtcaccaatagacacaaagagattaaggacaaaatgaaacaacaggtattaaattcaatgacaaag gaaactcagcagatgttgagaagcgaggagttgttctcttctgaccaccttcctctaccgtactggacagtgtacatcgc ctgggtcatcgttgctatagccgtggccacctcggcattctttctgcttttatacagcatgcagtggggcaaaagtaaat ctgaggaatggctatcttcgtttgttttctcattcttcgagtcgctgcttcttgtggatccattcaaggttgttgtgatt gcattgatcttcgccattctgttcagacgtcctgtagatgggagtagtccaaaggttaatatggagaggcttcgggacgc ttcaatggctttcagtgctggatctacacgaacttatctagctctttggaacgatgtaataatgaagaacaagaaaactt cagaggaagagctgaagaaggttcggaagaggcgagagcaggagcttcgtgctatggatgctttaatgaatttgatcatg tatggcgtgtttgtgttcatcctgtacagcattagctatgtcaatagggaccagagatctttcttcctgaaaaacaacgt ggacaactaccttcacgcccatggctttggccaagttggattctcctcggtaaacggaagagagcaatggaaagaatgga tggataagaccctgatacctacatgttatcctaaggaggagtataatggtagtcctcttagtaccactgacactcaattc tttggagatctgaccaatgttagagtcggtccggccaggttaagacaagttagaatggctacagatggatgcgtgtacaa gaagctgacttggccgtatccttgtgtaaatccatacaaccaatacaatgaagatgaatcggactactggcttgaatgga aaccttataacgccacgctgtataacactcctgcctataccaacatacacctcaccgccgacgcctggaaatacacaaaa tcaaaggacatatggggcataccaataactggacaatacgctacatacggcggtggagggtacttgctcaagtttcccaa ggatcgtattctatctgaacgtatgctgaatgagctgatggagtttaactggatagaccggggtactcgtgccgtgttta tggagtttactttgtataatgccaatacgaatctgtttctttatgctcagtttttggcagagttctcggagttgggagga gcttttaactggatagaatctcaagctttccgtccagtcactactgtcagtggtgtaggggctttttccttgttgtgcta cattttattttgttttcatctcatcattacaactgtaaagacagttctcaggatgaaaaaattaggctgcaaatcatttc tgttcgatccttggaacgtcgtggactcgttctgcgttttccttagttatgctttgatctttatgttcgggttcagattg agctacgcaaatcaggccatgcaaaagtattatgatgacctaggaacaggtgcccgagatttcatcaactttcaacacat tgtggtgtgggacaattctttcaatgtagtacttgctactctggtatttatagccaccattcgtatcctacggattttgg ggtataacaaaaggttttccgaggtcgccagcgtcatctctcatgccgctggtgagttaatgggctttagtgtggttttt gggatcatctattttgcctacatcagtcttggttaccttttatttggagtatcactcaaagaatacagaagtccttttgc cacatggggaagccttacaaatgccttgataggaaaaaacagcctggacaaaatgttagcggtggcaccacagatggcac aattctactattttacatacgtattctgcgtcttgatgacgcttgctaccatgtttgccgccatcttgaacaagagtata tcggaggtccgtgcagaatcatcaaaagagccggaaacattcggaatcacgaatcttctgaccaaatcaattcaggatgt ttttggttttgcatcaaagagcaaaaacaagaatattcaacgaaaaaaatacacgccgattccgggtaaaacgaattttg atgctccaaacatcttgcgtttggtgagggagacattcggcgaatacgacgacgacgaaaagaaaccgataccggaagcg gaagtggagagtggaatggcgaaaaagctaaagctgagtgatcaggatctattgttggatagagcgggtactccgtactc gccgtatgacgatatgttacgtacagagaccccgagggatatcaagttgttgttagaggattgtaatggaaagaaaactc cacattatccacatttcttatga |
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Protein
| Protein ID | pfu_aug2.0_136.1_20308.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_136.1_20308.t1 MRLYKAEESVPNVLNAIESSYNVKLQTTEVGAGPSKIIRPNLELSVEKVTKEILQNRTETPIKGIKLSLDQNDTEAIQGT LDIKQTVFDKPPTIYGDGIASLTSRALQLELSNKSIIPNLSFENKQTAYANRFEPQMTAGDPEQMFYLNFDVKNDDDVAL VYVEPDNFDIYNRNTWTLYELYYRAATFPKTSIFSFYKEFSIRDYTEGLGFKVMIPPMKKGQHFLGFKALSVPEPSKRRK RRSVAVDNTTTVAPSNTTNQLINVNVSVVLVTTGCRSWNEAEKKWVSDGCTVLPMSTPNETVCRCPRAAGNLFATTFYVP PNTIDFATVFSKFDASNAAIYGTCIALIVVWIIAVVLLRRQDLKDQERWSTYFLCDSDATDEYFYMVSVHTGLRKGAGTQ SRVNFVLSGEDDDSGVRILSDGVRKGFPTGSVRSFFMGTKYPLGDLTYLRIWHDNSGEGGEQSWYLNKVTVDDPQRHARY TFICERWLAVERDDGQVERVLPVCGRENLLQFNTLFFQHAQFNITENHLWLSLLIRPQRSSFTRVQRASCILALLFLTMI ANAMFFRSSSEEVNPNEVQIGILRFSMSILFISIIGILITTPPILIVTIIFKKCKPKPVTNRHKEIKDKMKQQVLNSMTK ETQQMLRSEELFSSDHLPLPYWTVYIAWVIVAIAVATSAFFLLLYSMQWGKSKSEEWLSSFVFSFFESLLLVDPFKVVVI ALIFAILFRRPVDGSSPKVNMERLRDASMAFSAGSTRTYLALWNDVIMKNKKTSEEELKKVRKRREQELRAMDALMNLIM YGVFVFILYSISYVNRDQRSFFLKNNVDNYLHAHGFGQVGFSSVNGREQWKEWMDKTLIPTCYPKEEYNGSPLSTTDTQF FGDLTNVRVGPARLRQVRMATDGCVYKKLTWPYPCVNPYNQYNEDESDYWLEWKPYNATLYNTPAYTNIHLTADAWKYTK SKDIWGIPITGQYATYGGGGYLLKFPKDRILSERMLNELMEFNWIDRGTRAVFMEFTLYNANTNLFLYAQFLAEFSELGG AFNWIESQAFRPVTTVSGVGAFSLLCYILFCFHLIITTVKTVLRMKKLGCKSFLFDPWNVVDSFCVFLSYALIFMFGFRL SYANQAMQKYYDDLGTGARDFINFQHIVVWDNSFNVVLATLVFIATIRILRILGYNKRFSEVASVISHAAGELMGFSVVF GIIYFAYISLGYLLFGVSLKEYRSPFATWGSLTNALIGKNSLDKMLAVAPQMAQFYYFTYVFCVLMTLATMFAAILNKSI SEVRAESSKEPETFGITNLLTKSIQDVFGFASKSKNKNIQRKKYTPIPGKTNFDAPNILRLVRETFGEYDDDEKKPIPEA EVESGMAKKLKLSDQDLLLDRAGTPYSPYDDMLRTETPRDIKLLLEDCNGKKTPHYPHFL |
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