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OIST Marine Genomics Unit since 2008

Gene
Gene Model IDpfu_aug2.0_1366.1_21570
Locus scaffold1366.1 : 1 ... 9043 : +
To GenomeBrowser scaffold1366.1:1..9043
Genes list of scaffold scaffold1366.1
Synonym pfu_aug1.0_11068.1_60853

Manual annotation
Hmmer Search for Pfam
query Total ID Target From To Eval Score cEval iEval Score
pfu_aug2.0_1366.1_21570.t1 1 1 GMC_oxred_N 1 73 2.4e-21 76.1 6.6e-25 3.2e-21 75.7
pfu_aug2.0_1366.1_21570.t1 1 1 GMC_oxred_C 184 330 1.70006e-41 141.8 5.60519e-45 3.00004e-41 141.0

Blast Hit to nr / sp
query Subject ID Subject Name evalue
pfu_aug2.0_1366.1_21570.t1 gi|751772002|ref|XP_011208347.1| PREDICTED: glucose dehydrogenase [FAD, quinone] [Bactrocera dorsalis] 0.0

Transcript
Transcript IDpfu_aug2.0_1366.1_21570.t1
Definition-
>pfu_aug2.0_1366.1_21570.t1
gttataattgaaaacaagaaggcagtaggaatacagtttataaaagaaggagtggaacatgacatcaaatgtaataagga
ggtgatcttatctgctggcgcaataggatcaccacaaatccttatgttatcaggagtcggtcctgagaaacatttgaagg
agcataagattccagtttatgccgacttacctgtaggtgaaaatcttcaagatcatctttttgcgcctcttccattcttt
cctaatcaatccttctcggtgacaccagcaaaaatgatgagtcccaaatcaatatgcaactggttatttcgaggaaaggg
ttatctcagtattagcggattggagggaaatgtcttttcaaaaacgaagacgagtgactcatacaattaccctgataccc
agctgcatctcttttccctttgtgtacccaaaggcgatattgaacgcgtaataaaacaagcaaacttaatgccggagttt
gtagaaagtgtatcgcagactgaaaatttgccgaaagagaggtttcttatcctagcaatcctactacacccaaagagtcg
cgggacaatcaggttaagaagcagcgatccattcgaccatcctataatcgacccatgttacttaagcgaatacgaggatg
tagaaaccatgataagaggtattaagttggcactacaacttgctaacacttccgttttgaaaaagtatggtttagatgat
acccatccagacgtcaacataccggcttttaagaagtacaaatatggtacagatgcatactgggaggaatatgtacgtca
tctgacttttactgtgtaccatccgacatcgacgtgtgtcatggggagggaggatgatcctaacgccgtggttgatccaa
ggctaagagtacgaggaatagagaacttgcgagttgcagactgttccgtgatgaggactataacatcaggtaataccaat
gcccccgccattatgatcggagaaaaagctgcagatcttatcttacaaagagacagtgtcaaagacataaaacagaggat
ccagcatatactgaataaactatga

Protein
Protein IDpfu_aug2.0_1366.1_21570.t1
Definition-
>pfu_aug2.0_1366.1_21570.t1
VIIENKKAVGIQFIKEGVEHDIKCNKEVILSAGAIGSPQILMLSGVGPEKHLKEHKIPVYADLPVGENLQDHLFAPLPFF
PNQSFSVTPAKMMSPKSICNWLFRGKGYLSISGLEGNVFSKTKTSDSYNYPDTQLHLFSLCVPKGDIERVIKQANLMPEF
VESVSQTENLPKERFLILAILLHPKSRGTIRLRSSDPFDHPIIDPCYLSEYEDVETMIRGIKLALQLANTSVLKKYGLDD
THPDVNIPAFKKYKYGTDAYWEEYVRHLTFTVYHPTSTCVMGREDDPNAVVDPRLRVRGIENLRVADCSVMRTITSGNTN
APAIMIGEKAADLILQRDSVKDIKQRIQHILNKL

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