Gene
| Gene Model ID | pfu_aug2.0_137.1_23535 |
|---|---|
| Locus | scaffold137.1 : 29182 ... 48545 : - |
| To GenomeBrowser | scaffold137.1:29182..48545 |
| Genes list of scaffold | scaffold137.1 |
| Synonym | pfu_aug1.0_5920.1_23919 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_137.1_23535.t1 | 4 | 1 | DUF4078 | 63 | 72 | 4.7e-16 | 58.6 | 2.0 | 15000.0 | -4.0 |
| pfu_aug2.0_137.1_23535.t1 | 4 | 2 | DUF4078 | 138 | 154 | 4.7e-16 | 58.6 | 0.29 | 2200.0 | -1.2 |
| pfu_aug2.0_137.1_23535.t1 | 4 | 3 | DUF4078 | 267 | 328 | 4.7e-16 | 58.6 | 6.3e-20 | 4.7e-16 | 58.6 |
| pfu_aug2.0_137.1_23535.t1 | 4 | 4 | DUF4078 | 361 | 379 | 4.7e-16 | 58.6 | 0.6 | 4500.0 | -2.2 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_137.1_23535.t1 | gi|676487755|ref|XP_009064400.1| | hypothetical protein LOTGIDRAFT_236038 [Lottia gigantea] | 0.0 |
| pfu_aug2.0_137.1_23535.t1 | gi|524880388|ref|XP_005096858.1| | PREDICTED: coiled-coil domain-containing protein 174-like isoform X3 [Aplysia californica] | 0.0 |
| pfu_aug2.0_137.1_23535.t1 | gi|524880384|ref|XP_005096856.1| | PREDICTED: coiled-coil domain-containing protein 174-like isoform X1 [Aplysia californica] | 0.0 |
| pfu_aug2.0_137.1_23535.t1 | gi|612042470|ref|XP_001366446.2| | PREDICTED: coiled-coil domain-containing protein 174 [Monodelphis domestica] | 0.0 |
| pfu_aug2.0_137.1_23535.t1 | gi|586476371|ref|XP_006868738.1| | PREDICTED: coiled-coil domain-containing protein 174 [Chrysochloris asiatica] | 0.0 |
Transcript
| Transcript ID | pfu_aug2.0_137.1_23535.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_137.1_23535.t1 atggctgacaagaaagttggagttgcatcttcttctatcatagaccttaaagctgaacttttccgaaaacaacaggaatt caaacagcagaaactagatagcttgggtggatatgctaggccaaaaccagtggagaagaaaacaaacatctggagcaaga aaaatgctggagtactacaaagatcacagagggacctggaggagaaacaggaagaggaaaatgtccatgaaaagtcaaat atcattatattaattttcttagactttcatgctcttgggaaggtatgttttgttactaaagatattgtggatgctttctc aacaataatatctgttccatttatagaagaggatggtagcaaagtattcctgatagacttccagaagaaagtcattgaca atattgtggaaaagagagaaaaagataggaaagaagaagaagaaagacaagccagagcagaggaagcaatactctctaaa gttgacacacccctccctgcaaacaaagatgaagaatgggtagactatactgattcatttggaaggtcccgtacatgtat gaaaaaggatctacctgcaaaccaattacaatccaaggacaagcatacaactgaaaggaatcatgaggaggtatctcccc agctattatcaaacgacatgagacgtgaaatgttacgacaaaaatgggaggaggaggagagagcggccatgaaccaacct attcattatgccaatgtacagtttgacgatgccaccgggggcattcgtgtttcacaaacacaggctttattatttctaga aattcggtcacatggtgttggattctaccaatttgctaaggacgaatcaacaagacaagaacagctacagacacttactg acataaggcaaaagactaaagaagagagggattggaaagataagattaaagacaagcgtaaagcaataagggaagcaagg ctagcaaaagtcaaacagcggaaaatgcagaagggaagcgaagggatgtttggcttaaacgatgaggaagattttgatca agatgacaagaagatgactcaaccattgaccacagacaatatggaggaaaaatcagaaatgaagaaggaatcatattcac ctaaaaaggaggaggaagaaacaaagaagattcatcctataagagaatgggacatcggcaaaaagaatttgtttccagcg gtatcagaagcaaaatatcttgaagatcgtcgaacggaaagatgtcaagaatttgctcctcctnnnnnnnnnnnnnnnnn nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn nnnnnnnnnnnnnnaatttctactatgaaaatacttcaacaaaaagtgaagagactagtgttaaacctaacaacatttca tcatcgcataaagaagttttacctcaccctgaaaatgtccaagatataccattaccaaatctacctgtacatacttcttc atatgaaaatggacctcgcttctcccaatacagtagaacaggttcagaaaaatgtcaggaatttgcccctcctccgtttt atttccaggacatatctacacaaaggacagaagctgatttcaatcctaatattattcccccaaattatgtagaaccaaga attgtgcaaaatacaccattacagacaactgcactaccaacaacaccgctactaacaccgcagttaccgacagcaccttt acagacaacagtctttccaagaccaccactaccgacacaacagttaccgacaccgtatcatatgggtattcaatttcccc aaaatagtgagatacctgcaagactaccacagacatatctgcatccttcatttagcagtttcccagcaagcggtactgtt cccatagtgaatactgagtatcctgtctctagccagaatcaaacagaagaatcagttgcgacagatgctcagaaacccag agcaaattatactatcattgatccaagactagtacaaaataagacagttctccagtcagagatgccaaatctttctgtag ccaagaggtga |
|
Protein
| Protein ID | pfu_aug2.0_137.1_23535.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_137.1_23535.t1 MADKKVGVASSSIIDLKAELFRKQQEFKQQKLDSLGGYARPKPVEKKTNIWSKKNAGVLQRSQRDLEEKQEEENVHEKSN IIILIFLDFHALGKVCFVTKDIVDAFSTIISVPFIEEDGSKVFLIDFQKKVIDNIVEKREKDRKEEEERQARAEEAILSK VDTPLPANKDEEWVDYTDSFGRSRTCMKKDLPANQLQSKDKHTTERNHEEVSPQLLSNDMRREMLRQKWEEEERAAMNQP IHYANVQFDDATGGIRVSQTQALLFLEIRSHGVGFYQFAKDESTRQEQLQTLTDIRQKTKEERDWKDKIKDKRKAIREAR LAKVKQRKMQKGSEGMFGLNDEEDFDQDDKKMTQPLTTDNMEEKSEMKKESYSPKKEEEETKKIHPIREWDIGKKNLFPA VSEAKYLEDRRTERCQEFAPPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXNFYYENTSTKSEETSVKPNNIS SSHKEVLPHPENVQDIPLPNLPVHTSSYENGPRFSQYSRTGSEKCQEFAPPPFYFQDISTQRTEADFNPNIIPPNYVEPR IVQNTPLQTTALPTTPLLTPQLPTAPLQTTVFPRPPLPTQQLPTPYHMGIQFPQNSEIPARLPQTYLHPSFSSFPASGTV PIVNTEYPVSSQNQTEESVATDAQKPRANYTIIDPRLVQNKTVLQSEMPNLSVAKR |
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