Gene
| Gene Model ID | pfu_aug2.0_137.1_23537 |
|---|---|
| Locus | scaffold137.1 : 142413 ... 150415 : - |
| To GenomeBrowser | scaffold137.1:142413..150415 |
| Genes list of scaffold | scaffold137.1 |
| Synonym | pfu_aug1.0_96977.1_64165 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_137.1_23537.t1 | 2 | 1 | Cupin_8 | 57 | 277 | 1.2e-38 | 133.0 | 4.79945e-42 | 1.2e-38 | 133.0 |
| pfu_aug2.0_137.1_23537.t1 | 2 | 1 | JmjC | 92 | 122 | 9.1e-06 | 25.8 | 1.2 | 3000.0 | -1.6 |
| pfu_aug2.0_137.1_23537.t1 | 2 | 2 | JmjC | 236 | 271 | 9.1e-06 | 25.8 | 1.3e-08 | 3.2e-05 | 24.1 |
| pfu_aug2.0_137.1_23537.t1 | 2 | 2 | Cupin_8 | 318 | 374 | 1.2e-38 | 133.0 | 0.22 | 540.0 | -0.2 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_137.1_23537.t1 | gi|676495907|ref|XP_009067039.1| | hypothetical protein LOTGIDRAFT_170151 [Lottia gigantea] | 0.0 |
| pfu_aug2.0_137.1_23537.t1 | gi|260799812|ref|XP_002594878.1| | hypothetical protein BRAFLDRAFT_86046 [Branchiostoma floridae] | 0.0 |
| pfu_aug2.0_137.1_23537.t1 | gi|196006511|ref|XP_002113122.1| | hypothetical protein TRIADDRAFT_63974 [Trichoplax adhaerens] | 0.0 |
| pfu_aug2.0_137.1_23537.t1 | gi|196006507|ref|XP_002113120.1| | hypothetical protein TRIADDRAFT_56963 [Trichoplax adhaerens] | 0.0 |
| pfu_aug2.0_137.1_23537.t1 | gi|390351239|ref|XP_003727613.1| | PREDICTED: putative lysine-specific demethylase JMJD5 isoform X1 [Strongylocentrotus purpuratus] | 0.0 |
Transcript
| Transcript ID | pfu_aug2.0_137.1_23537.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_137.1_23537.t1 atgttcttcttgtgctcgagttatattgttcagtcaatttgtgtagtaatatttttattgaaactctgtttgtctgaaag aatattagaaaatgaggcaggccacttaaaaccatttggagccaccaattctgttttggacgtggaaagaatttccggat tcccgaatccaagaacattttttgaaaaatatgcaattcctaaaaggccgttagtgatgagagatgcggcaaaagtttct cgtgcctttcacctgtggacagacgaatatttctactctgcagagggttcaaagtcacacaaagtcagcacagaaacaat gaaaaaggaagaccggaatcaacagacaaaagaaatgtctttctttgattttgttctcaaatataatgactctgatattt atatggttaatccagtgccagagtttatcagagatgatgtgacagttccttgctctttacaatgtgaagatgtcatagat ggcaaaatagtggaatctgtgatgtggtttagtagtggcggtaccaagtctgtggtacatacagactctgtggataacat caactgtttgtacagaggtgataagacatttgtaatggtggatccagacatatatggtgacaaagtagatatggaccatc cagagggggcttactcaagtgttgatgtagatagggtggattataacaagtatcctggtttggcagatgttgaatactat accattaacattactgccggggattgcctctttattccatataaatggattcatcaagttagatcctatggtagtaatat tgcagtaaatatttggtggaatcacttcaagaacaaagacattaaccttgacctctgtaaccatcaatgtaacctggaca tgaccttgggaaatgtagagtttggaggttttgagcaggtcatggagactttagattcaatcaaggaccacatgaatgga cttgttctatcaaagaaagaaatagattatgaaggatttataactgccatagttgggcaagacaaaaaagaaatggacag aaagaagataaattatcatgaaaagaccaaaaagctatttgtttccatggatacaaattcagatggaaaaatgaccaaag aagaattacagaatttatcagaatcagtatggacagacatttggagaaatatgagagaattatctgactttttagatgat tttgataaaatgagacatggagatttcagattcaaagatgaattatga |
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Protein
| Protein ID | pfu_aug2.0_137.1_23537.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_137.1_23537.t1 MFFLCSSYIVQSICVVIFLLKLCLSERILENEAGHLKPFGATNSVLDVERISGFPNPRTFFEKYAIPKRPLVMRDAAKVS RAFHLWTDEYFYSAEGSKSHKVSTETMKKEDRNQQTKEMSFFDFVLKYNDSDIYMVNPVPEFIRDDVTVPCSLQCEDVID GKIVESVMWFSSGGTKSVVHTDSVDNINCLYRGDKTFVMVDPDIYGDKVDMDHPEGAYSSVDVDRVDYNKYPGLADVEYY TINITAGDCLFIPYKWIHQVRSYGSNIAVNIWWNHFKNKDINLDLCNHQCNLDMTLGNVEFGGFEQVMETLDSIKDHMNG LVLSKKEIDYEGFITAIVGQDKKEMDRKKINYHEKTKKLFVSMDTNSDGKMTKEELQNLSESVWTDIWRNMRELSDFLDD FDKMRHGDFRFKDEL |
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