Genome browser

OIST Marine Genomics Unit since 2008

Gene
Gene Model IDpfu_aug2.0_1372.1_08341
Locus scaffold1372.1 : 43157 ... 74405 : -
To GenomeBrowser scaffold1372.1:43157..74405
Genes list of scaffold scaffold1372.1
Synonym pfu_aug1.0_5270.1_45161

Manual annotation
Annotation by Blast2GO
Annotation GO
ammonium transporter-like protein GO:0015696 GO:0016020

Hmmer Search for Pfam
query Total ID Target From To Eval Score cEval iEval Score
pfu_aug2.0_1372.1_08341.t1 1 1 Ammonium_transp 17 423 0.0 387.3 0.0 0.0 387.1

Transcript
Transcript IDpfu_aug2.0_1372.1_08341.t1
Definition-
>pfu_aug2.0_1372.1_08341.t1
atgactgtaacgctgacttccgatgtcttggagaatttggatatgatgtttctgatcataatgggaatgtgcgtttattt
catgcaatgtggatttgctttcttagaagctggagcagttcgcagcaagaacgccaccaatatcctcattaaaaatgtta
tggattcatttgtatccggtgtatcttactggctatttggttatgcgtttgcatatggagacgggacttcgcccaacaag
tttatcgggtttaagcgtttcgcctcagatgattttgattctgcgacgtatgcctcgtggtttttccagtacacatttgc
tgccaccgctgccaccattgtatctggagctgtagcagaaagatgtgaatttatagcttatttcacctatagcatattta
ttacaggttttatatatccagttgttactcattgggcttggggtggtggatggttaagtcaaggcagagaatactcatca
attggcgctacagttgcttaccaggactttgcaggcagtggggtagtgcatgtattaggaggtatggctgctttgatagg
tgccatattactaggtcctaggattggtcgtttccataaagaatctggaactgtagggcagttacgtggacattcagttc
cgatcgcagcccttggtggtttcatcttgttctttggattccttgccttcaacggtggatcccagctcagcatcaccacc
aaaggggacggggcagcagtggctctttctgttgtcaatactatcatatcggcatcgttttctgcttttggttcgctcat
tattaacagactacacttccttggtagctcatggagtttattggccaccataaacggtgcattgactggaatggtagcgg
cttgtgctgggtgtaactccatgtacccttggggtgcttgtattcttggtatcatctcctctgtagtgtacactgccgta
tcatatctcctgaagaaacttaggatcgacgatcctttagatgctgttgcagtccatttaggtggtggtacatggggagt
gattgcaatagctttttttgataaggaagacggtattttgatagctggtaacgcgaaatctggatacaaacttggctggc
agttggcgggtttgctggcaatagccggttggtctgctgccttctcccttgctttgtttggaatcttgaaactattgaag
atacttcgtgtttcaccagaacttgaagaaaagggattagatattcctaagcataaagaaccggcctacccagtagaggc
ttatggacatggacacattgaacagttgattcagattctggaaaaccaaccaaaagagctgacattccgttacactaaca
tgacatttaacgatgaagagtcaaatggcacgacttttgagacaccggaagttaagcaacaccgtgacaagatgaacaag
gtgggtgtggccaaggtggagttacaggacgcagatggtgtagaaaataataacaaaaaatattga

Protein
Protein IDpfu_aug2.0_1372.1_08341.t1
Definition-
>pfu_aug2.0_1372.1_08341.t1
MTVTLTSDVLENLDMMFLIIMGMCVYFMQCGFAFLEAGAVRSKNATNILIKNVMDSFVSGVSYWLFGYAFAYGDGTSPNK
FIGFKRFASDDFDSATYASWFFQYTFAATAATIVSGAVAERCEFIAYFTYSIFITGFIYPVVTHWAWGGGWLSQGREYSS
IGATVAYQDFAGSGVVHVLGGMAALIGAILLGPRIGRFHKESGTVGQLRGHSVPIAALGGFILFFGFLAFNGGSQLSITT
KGDGAAVALSVVNTIISASFSAFGSLIINRLHFLGSSWSLLATINGALTGMVAACAGCNSMYPWGACILGIISSVVYTAV
SYLLKKLRIDDPLDAVAVHLGGGTWGVIAIAFFDKEDGILIAGNAKSGYKLGWQLAGLLAIAGWSAAFSLALFGILKLLK
ILRVSPELEEKGLDIPKHKEPAYPVEAYGHGHIEQLIQILENQPKELTFRYTNMTFNDEESNGTTFETPEVKQHRDKMNK
VGVAKVELQDADGVENNNKKY

  • MGU Home
  • Genome Projects
  • Information
  • Genome Browser
  • Blast Search
  • Keyword Search
  • Downloads

Gene ID:



Keyword:



  • Login

copyright © Marine Genomics Unit 2015
Okinawa Institute of Science and Technology
1919-1 Tancha, Onna-son, Kunigami-gun, Okinawa, Japan 904-0495