Gene
| Gene Model ID | pfu_aug2.0_1372.1_08342 |
|---|---|
| Locus | scaffold1372.1 : 74452 ... 99095 : - |
| To GenomeBrowser | scaffold1372.1:74452..99095 |
| Genes list of scaffold | scaffold1372.1 |
| Synonym | pfu_aug1.0_2272.1_66253 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_1372.1_08342.t1 | 3 | 1 | Ammonium_transp | 21 | 141 | 0.0 | 252.9 | 6.5e-36 | 9.7e-32 | 109.9 |
| pfu_aug2.0_1372.1_08342.t1 | 3 | 2 | Ammonium_transp | 143 | 268 | 0.0 | 252.9 | 4.2e-34 | 6.3e-30 | 103.9 |
| pfu_aug2.0_1372.1_08342.t1 | 3 | 3 | Ammonium_transp | 266 | 355 | 0.0 | 252.9 | 7.3e-18 | 1.1e-13 | 50.4 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_1372.1_08342.t1 | gi|699248542|ref|XP_009860367.1| | PREDICTED: ammonium transporter 2 isoform X1 [Ciona intestinalis] | 0.0 |
| pfu_aug2.0_1372.1_08342.t1 | gi|156406743|ref|XP_001641204.1| | predicted protein [Nematostella vectensis] | 0.0 |
Transcript
| Transcript ID | pfu_aug2.0_1372.1_08342.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_1372.1_08342.t1 atggagaacgtaacatcggtggatccaatggcggatctaagtacatcactgaatcaattctttcttatcatcatgggcat gtgtgtatacttcatgcaatgtggatttgctttcctagaagctggagcagttcgcagcaagaacgctaccaatatcctca tcaaaaatgtgatggactcatttgtatcaggtgtatcgtactggctatttggttatgcttttgcctatggagacggcagc tcggctaacaagtttattgggtttaaacatttcgcctcccatgaaatggagtctgagacttttgcctcgtggtttttcca gtacacatttgctgccaccgctgccaccattgtatctggagctgtagcagaaagatgtgaattcatagcttatttcacct atagcatctttataacaggtacattattacaggactttgcaggaagtggggtagtgcatgtattaggaggcgtcgcagcc ttggtaggagcaattctacttggaccaagacttggtcgattccataaagagtcaggaactataggacagttacgagggca ttcagttccaattgctgctctgggtggtttcatcctgttctttggattccttgccttcaacggcggatcccagctcagta tcaccaacaaaggggacggtgcagcagtggctctttctgttgtcaataccattatatcggcgtccttcgctgcttttggt tcactcatcattaatagactaaactttcttggaagctcatggagtttactggcaaccataaacggcgcacttactggaat ggtcaaagttcatttaggtggtggcacatggggagtgatcgcaatagcttttctagataaagaggaaggtatttttgtgg ctggtgacttaaaatctggatacaaactagcatggcaattgataggttggtcgtctatagtcggttggtctgctgtctta tccctcattatatttggactgttgaaactatgtaaggttcttcgtgtgccggcagagatagaggaaaagggattggatat tcctaaacataaagaaccggcatacccagtagaggcttatgggcatggacacattgaaaagttgattcagattctggaaa atcatccaagggagatcgaatttagctacaccaacatggcgtttaacaaagatgaaccaaacagcgcttactttgagaca ccggaagttaagcgtcaccgtgataagatgatggagaacggtacagatgtaaagacggtcaagttacaggtgatggacga aatggacaataaacaaacagaaatgaatagcagaatgtaa |
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Protein
| Protein ID | pfu_aug2.0_1372.1_08342.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_1372.1_08342.t1 MENVTSVDPMADLSTSLNQFFLIIMGMCVYFMQCGFAFLEAGAVRSKNATNILIKNVMDSFVSGVSYWLFGYAFAYGDGS SANKFIGFKHFASHEMESETFASWFFQYTFAATAATIVSGAVAERCEFIAYFTYSIFITGTLLQDFAGSGVVHVLGGVAA LVGAILLGPRLGRFHKESGTIGQLRGHSVPIAALGGFILFFGFLAFNGGSQLSITNKGDGAAVALSVVNTIISASFAAFG SLIINRLNFLGSSWSLLATINGALTGMVKVHLGGGTWGVIAIAFLDKEEGIFVAGDLKSGYKLAWQLIGWSSIVGWSAVL SLIIFGLLKLCKVLRVPAEIEEKGLDIPKHKEPAYPVEAYGHGHIEKLIQILENHPREIEFSYTNMAFNKDEPNSAYFET PEVKRHRDKMMENGTDVKTVKLQVMDEMDNKQTEMNSRM |
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