Gene
| Gene Model ID | pfu_aug2.0_1374.1_14999 |
|---|---|
| Locus | scaffold1374.1 : 6266 ... 9492 : + |
| To GenomeBrowser | scaffold1374.1:6266..9492 |
| Genes list of scaffold | scaffold1374.1 |
| Synonym | pfu_aug1.0_233.1_22093 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_1374.1_14999.t1 | 2 | 1 | Claudin_2 | 13 | 47 | 1.4e-10 | 41.1 | 0.059 | 130.0 | 2.2 |
| pfu_aug2.0_1374.1_14999.t1 | 1 | 1 | PMP22_Claudin | 20 | 186 | 5.6e-14 | 52.1 | 5.7e-17 | 1.2e-13 | 51.0 |
| pfu_aug2.0_1374.1_14999.t1 | 2 | 2 | Claudin_2 | 24 | 188 | 1.4e-10 | 41.1 | 8.4e-14 | 1.8e-10 | 40.7 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_1374.1_14999.t1 | gi|676458488|ref|XP_009054992.1| | hypothetical protein LOTGIDRAFT_161343 [Lottia gigantea] | 7.0e-26 |
| pfu_aug2.0_1374.1_14999.t1 | gi|524898412|ref|XP_005105655.1| | PREDICTED: uncharacterized protein LOC101851819 [Aplysia californica] | 2.0e-15 |
| pfu_aug2.0_1374.1_14999.t1 | gi|524899904|ref|XP_005106378.1| | PREDICTED: uncharacterized protein LOC101861153, partial [Aplysia californica] | 3.0e-12 |
Transcript
| Transcript ID | pfu_aug2.0_1374.1_14999.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_1374.1_14999.t1 atgtcagtattagatgattttaagggtgcttcaatcataggaaagattgcattgattttactccttgttgcatctttctg tgtctgtattgcctttacgtgtacaggctggggcggagaggacgcttactctacaacggcacttggcgtccgatatgtaa gccagaaaacttactggggactttggagacggtgtgtggatactaatgtggtcagtccgtgtgtcaacctggatgggact ccaaacgattggtgggcatacacccaagcagggtcctgtttcggattttttggtaccttggtctcctgtactttgatgat tttgtatgtttttgtcggtaaatgtaagaaaaatggtgaaatggccatagccgcaggaatcatttgtattgttacaggta ttcttttcttaattgcttgtatagtgttcggcgtgaaatggaataaatactacggcgacacgtatactcttggatacttg gcctatgaccattacctatcgtacgcttttggattcgctgtcgtcggagcccttctggaaatagtgtctggagtgttgtg cataatagaggccaagaaaggagggggtacgggggcctctggttaa |
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Protein
| Protein ID | pfu_aug2.0_1374.1_14999.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_1374.1_14999.t1 MSVLDDFKGASIIGKIALILLLVASFCVCIAFTCTGWGGEDAYSTTALGVRYVSQKTYWGLWRRCVDTNVVSPCVNLDGT PNDWWAYTQAGSCFGFFGTLVSCTLMILYVFVGKCKKNGEMAIAAGIICIVTGILFLIACIVFGVKWNKYYGDTYTLGYL AYDHYLSYAFGFAVVGALLEIVSGVLCIIEAKKGGGTGASG |
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