Gene
| Gene Model ID | pfu_aug2.0_13740.1_03164 |
|---|---|
| Locus | scaffold13740.1 : 1 ... 3154 : + |
| To GenomeBrowser | scaffold13740.1:1..3154 |
| Genes list of scaffold | scaffold13740.1 |
| Synonym | pfu_aug1.0_9311.1_09936 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_13740.1_03164.t1 | 2 | 1 | Glyco_transf_25 | 25 | 63 | 1.1e-12 | 47.9 | 7.7e-09 | 5.7e-05 | 22.8 |
| pfu_aug2.0_13740.1_03164.t1 | 2 | 2 | Glyco_transf_25 | 55 | 80 | 1.1e-12 | 47.9 | 1.3e-10 | 9.6e-07 | 28.6 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_13740.1_03164.t1 | gi|524913874|ref|XP_005111760.1| | PREDICTED: procollagen galactosyltransferase 1-like [Aplysia californica] | 8.0e-16 |
| pfu_aug2.0_13740.1_03164.t1 | gi|260797405|ref|XP_002593693.1| | hypothetical protein BRAFLDRAFT_107673 [Branchiostoma floridae] | 4.0e-15 |
| pfu_aug2.0_13740.1_03164.t1 | gi|751229729|ref|XP_011168342.1| | PREDICTED: glycosyltransferase 25 family member isoform X2 [Solenopsis invicta] | 5.0e-15 |
| pfu_aug2.0_13740.1_03164.t1 | gi|675863574|ref|XP_009017347.1| | hypothetical protein HELRODRAFT_111764 [Helobdella robusta] | 8.0e-15 |
| pfu_aug2.0_13740.1_03164.t1 | gi|556978373|ref|XP_005996271.1| | PREDICTED: procollagen galactosyltransferase 2-like [Latimeria chalumnae] | 1.0e-14 |
Transcript
| Transcript ID | pfu_aug2.0_13740.1_03164.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_13740.1_03164.t1 tgaacaatcgtgctttgtacagatctgtacatctagaggaggaatctgaacttacactggatatgatgggatttgatcag atatacataatcaatttaaaaagacgaccagagagacggaccagaatgttaaacatgctgaaaaatcatggcgtaaaggc taaagttacggaggccgttgatggacaagaattaaccctaggtgaagttggctgttttcttagtcattatttcatctgga aagat |
|
Protein
| Protein ID | pfu_aug2.0_13740.1_03164.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_13740.1_03164.t1 NNRALYRSVHLEEESELTLDMMGFDQIYIINLKRRPERRTRMLNMLKNHGVKAKVTEAVDGQELTLGEVGCFLSHYFIWK D |
|