Gene
| Gene Model ID | pfu_aug2.0_1376.1_21579 |
|---|---|
| Locus | scaffold1376.1 : 102338 ... 107355 : - |
| To GenomeBrowser | scaffold1376.1:102338..107355 |
| Genes list of scaffold | scaffold1376.1 |
| Synonym | pfu_aug1.0_7752.1_02496 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_1376.1_21579.t2 | 1 | 1 | SAC3_GANP | 48 | 278 | 3.6e-31 | 108.3 | 3.1e-35 | 4.5e-31 | 107.9 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_1376.1_21579.t2 | gi|632962023|ref|XP_007897081.1| | PREDICTED: SAC3 domain-containing protein 1-like [Callorhinchus milii] | 0.0 |
| pfu_aug2.0_1376.1_21579.t2 | gi|585676220|ref|XP_006818916.1| | PREDICTED: germinal-center associated nuclear protein-like [Saccoglossus kowalevskii] | 0.0 |
Transcript
| Transcript ID | pfu_aug2.0_1376.1_21579.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_1376.1_21579.t1 atggaagaatatggtgtaaataaaactaagttacaacaacaaacagtgcgaggttcttgtcagaaaatgtgtccagataa tgaaataaaactgaggataagggagaagcttgttcatcctctggagatggtaaccagaaatggaaggttagaaatagatc cagatagaatagtcaaggagtatagtcgctcagctgcagggagacatgaccctgaccctggtgaccttcgacctgcttca gttttacatcaaacagtagagtaccttctgcaacaagtaatactcacagacaccagaccttggaatgaggtttatgattt tgtctttgatcgactgcgggcagttagacaagacatggtcattcagaatttaaatggtcacgatgccattcaaatcttgg aaaggattatacgattccttgtcttctctgggtataggttgtctgaagaggaaatatcagtgtttgatccaaccataaac aatcagcatttacaagaatgtatgaagcggttactctacatttatagggagtatgacttacagacagacagcagagtgaa tcaagacatacagatggacaatagagtggaatttgagtgcatttatcttttatttaaccttggacaaagtgaggctatca tgcactattatgatttgccagaaaaattaaggaaacagagtataattcatcagtgctatttagctaatatacactatgta cttggtaattatgtgagagtgctgcggataactggttcgtcttctctcgttaatcatcctctactactctgtgctgtaca cagacatatttctggtatacagaggaaagcacttgagatgtacagcaatggatttaattctaaggcattgaaattcccta tctctaagctggttgacttgttctggttcccaagtgaagagagctgtgcatctatctgtcagtcatgtggtctgacagta agtcttggagaacatgtaatattcctgaagcagaacttcaagtcaccagaaaaaatgcgacagtaccatctatgtggcat tgattctgctttacagaaacacaaacttgacactttacttgtgtgtggaatgacttctttatcagaatctaagaagttag attctaattttatacaaaatgaaagtgataaaacataa |
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| Transcript ID | pfu_aug2.0_1376.1_21579.t2 |
| Definition | - |
>pfu_aug2.0_1376.1_21579.t2 atgtgtccagataatgaaataaaactgaggataagggagaagcttgttcatcctctggagatggtaaccagaaatggaag gttagaaatagatccagatagaatagtcaaggagtatagtcgctcagctgcagggagacatgaccctgaccctggtgacc ttcgacctgcttcagttttacatcaaacagtagagtaccttctgcaacaagtaatactcacagacaccagaccttggaat gaggtttatgattttgtctttgatcgactgcgggcagttagacaagacatggtcattcagaatttaaatggtcacgatgc cattcaaatcttggaaaggattatacgattccttgtcttctctgggtataggttgtctgaagaggaaatatcagtgtttg atccaaccataaacaatcagcatttacaagaatgtatgaagcggttactctacatttatagggagtatgacttacagaca gacagcagagtgaatcaagacatacagatggacaatagagtggaatttgagtgcatttatcttttatttaaccttggaca aagtgaggctatcatgcactattatgatttgccagaaaaattaaggaaacagagtataattcatcagtgctatttagcta atatacactatgtacttggtaattatgtgagagtgctgcggataactggttcgtcttctctcgttaatcatcctctacta ctctgtgctgtacacagacatatttctggtatacagaggaaagcacttgagatgtacagcaatggatttaattctaaggc attgaaattccctatctctaagctggttgacttgttctggttcccaagtgaagagagctgtgcatctatctgtcagtcat gtggtctgacagtaagtcttggagaacatgtaatattcctgaagcagaacttcaagtcaccagaaaaaatgcgacagtac catctatgtggcattgattctgctttacagaaacacaaacttgacactttacttgtgtgtggaatgacttctttatcaga atctaagaagttagattctaattttatacaaaatgaaagtgataaaacataa |
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Protein
| Protein ID | pfu_aug2.0_1376.1_21579.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_1376.1_21579.t1 MEEYGVNKTKLQQQTVRGSCQKMCPDNEIKLRIREKLVHPLEMVTRNGRLEIDPDRIVKEYSRSAAGRHDPDPGDLRPAS VLHQTVEYLLQQVILTDTRPWNEVYDFVFDRLRAVRQDMVIQNLNGHDAIQILERIIRFLVFSGYRLSEEEISVFDPTIN NQHLQECMKRLLYIYREYDLQTDSRVNQDIQMDNRVEFECIYLLFNLGQSEAIMHYYDLPEKLRKQSIIHQCYLANIHYV LGNYVRVLRITGSSSLVNHPLLLCAVHRHISGIQRKALEMYSNGFNSKALKFPISKLVDLFWFPSEESCASICQSCGLTV SLGEHVIFLKQNFKSPEKMRQYHLCGIDSALQKHKLDTLLVCGMTSLSESKKLDSNFIQNESDKT |
|
| Protein ID | pfu_aug2.0_1376.1_21579.t2 |
| Definition | - |
>pfu_aug2.0_1376.1_21579.t2 MCPDNEIKLRIREKLVHPLEMVTRNGRLEIDPDRIVKEYSRSAAGRHDPDPGDLRPASVLHQTVEYLLQQVILTDTRPWN EVYDFVFDRLRAVRQDMVIQNLNGHDAIQILERIIRFLVFSGYRLSEEEISVFDPTINNQHLQECMKRLLYIYREYDLQT DSRVNQDIQMDNRVEFECIYLLFNLGQSEAIMHYYDLPEKLRKQSIIHQCYLANIHYVLGNYVRVLRITGSSSLVNHPLL LCAVHRHISGIQRKALEMYSNGFNSKALKFPISKLVDLFWFPSEESCASICQSCGLTVSLGEHVIFLKQNFKSPEKMRQY HLCGIDSALQKHKLDTLLVCGMTSLSESKKLDSNFIQNESDKT |
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