Gene
| Gene Model ID | pfu_aug2.0_1376.1_21580 |
|---|---|
| Locus | scaffold1376.1 : 107926 ... 111111 : + |
| To GenomeBrowser | scaffold1376.1:107926..111111 |
| Genes list of scaffold | scaffold1376.1 |
| Synonym | pfu_aug1.0_7752.1_02495 |
Manual annotation
Annotation by Blast2GO
| Annotation | GO |
|---|---|
| riboflavin kinase | GO:0008531 GO:0009231 GO:0016310 |
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_1376.1_21580.t1 | 1 | 1 | Flavokinase | 1 | 68 | 4.6e-22 | 78.2 | 3.7e-26 | 5.5e-22 | 77.9 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_1376.1_21580.t1 | gi|189536414|ref|XP_689407.3| | PREDICTED: riboflavin kinase [Danio rerio] | 2.0e-33 |
| pfu_aug2.0_1376.1_21580.t1 | gi|676487245|ref|XP_009064232.1| | hypothetical protein LOTGIDRAFT_168116 [Lottia gigantea] | 5.0e-33 |
| pfu_aug2.0_1376.1_21580.t1 | gi|557017514|ref|XP_006009162.1| | PREDICTED: riboflavin kinase [Latimeria chalumnae] | 1.0e-32 |
| pfu_aug2.0_1376.1_21580.t1 | gi|734607238|ref|XP_010730802.1| | PREDICTED: riboflavin kinase isoform X2 [Larimichthys crocea] | 4.0e-32 |
| pfu_aug2.0_1376.1_21580.t1 | gi|602672842|ref|XP_007441922.1| | PREDICTED: riboflavin kinase [Python bivittatus] | 6.0e-32 |
Transcript
| Transcript ID | pfu_aug2.0_1376.1_21580.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_1376.1_21580.t1 atgtcaataggatggaatccttactacaataacactaagaaatccatggaaacacatatcatacataccttcaaagaaga tttttatgggtcatcattaaaagtcattatactaggatttattaggaagatgtgtgactttagctcactagatgaactta ttacagcaatagaaaacgatatacagcagtccaaagataagttagaacttccagaaaatcaaactttcaaatcaaacaac ttcttcaaagacacagacagcaaacaagattga |
|
Protein
| Protein ID | pfu_aug2.0_1376.1_21580.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_1376.1_21580.t1 MSIGWNPYYNNTKKSMETHIIHTFKEDFYGSSLKVIILGFIRKMCDFSSLDELITAIENDIQQSKDKLELPENQTFKSNN FFKDTDSKQD |
|