Gene
Gene Model ID | pfu_aug2.0_1376.1_21581 |
---|---|
Locus | scaffold1376.1 : 145866 ... 146387 : + |
To GenomeBrowser | scaffold1376.1:145866..146387 |
Genes list of scaffold | scaffold1376.1 |
Synonym | pfu_aug1.0_8149.1_67806 |
Manual annotation
Hmmer Search for Pfam
query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
---|---|---|---|---|---|---|---|---|---|---|
pfu_aug2.0_1376.1_21581.t1 | 1 | 1 | C1q | 3 | 105 | 3.9e-15 | 55.9 | 8.5e-19 | 4.2e-15 | 55.8 |
pfu_aug2.0_1376.1_21581.t1 | 1 | 1 | PA14 | 4 | 81 | 2.1e-06 | 27.4 | 5.5e-10 | 2.7e-06 | 27.0 |
Blast Hit to nr / sp
query | Subject ID | Subject Name | evalue |
---|---|---|---|
pfu_aug2.0_1376.1_21581.t1 | gi|742169250|ref|XP_010885200.1| | PREDICTED: caprin-2 isoform X1 [Esox lucius] | 1.0e-06 |
Transcript
Transcript ID | pfu_aug2.0_1376.1_21581.t1 |
---|---|
Definition | - |
>pfu_aug2.0_1376.1_21581.t1 atgaattccaataacggcaactattatgaccgcaccacaggcaagtttaaagttcccagagacggtccttatgtcttcgc atggaatgtcgttacccaggccaaatacagtttgaacgccgttctgtatgtaaatgaaaagaaagttagtagagcacagg ctgacggatcgacaggacctcagaacagctctggatctaacaccatagtgttaaatcttaaagaaggtgatttagttaat cttagatgcggagactggagagatcaggagaagcgtcaattctatggtggtccggtttccacatttgcaggatgggcact ataa |
Protein
Protein ID | pfu_aug2.0_1376.1_21581.t1 |
---|---|
Definition | - |
>pfu_aug2.0_1376.1_21581.t1 MNSNNGNYYDRTTGKFKVPRDGPYVFAWNVVTQAKYSLNAVLYVNEKKVSRAQADGSTGPQNSSGSNTIVLNLKEGDLVN LRCGDWRDQEKRQFYGGPVSTFAGWAL |