Gene
| Gene Model ID | pfu_aug2.0_138.1_26914 |
|---|---|
| Locus | scaffold138.1 : 53176 ... 69183 : + |
| To GenomeBrowser | scaffold138.1:53176..69183 |
| Genes list of scaffold | scaffold138.1 |
| Synonym | pfu_aug1.0_31188.1_70007 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_138.1_26914.t1 | 1 | 1 | Beta_helix | 35 | 128 | 1.2e-13 | 51.1 | 4.4e-17 | 2.2e-13 | 50.2 |
| pfu_aug2.0_138.1_26914.t1 | 2 | 1 | NosD | 36 | 137 | 2.0e-10 | 40.2 | 4.1e-14 | 2.0e-10 | 40.2 |
| pfu_aug2.0_138.1_26914.t1 | 2 | 2 | NosD | 228 | 228 | 2.0e-10 | 40.2 | 0.74 | 3700.0 | -3.2 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_138.1_26914.t1 | gi|156349424|ref|XP_001622052.1| | hypothetical protein NEMVEDRAFT_v1g81 [Nematostella vectensis] | 9.0e-22 |
Transcript
| Transcript ID | pfu_aug2.0_138.1_26914.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_138.1_26914.t1 atggtaagagatcaggcatcgtggtgctcggaagcgggcggggtcaaatcaggaataacgagatttaccagaacaaagag gctggagtgtatattctgtacaggggaaatcccattatcacataacacaataatggggaaccactggggaggagtggata tacgtcacgctggggacccagttataacaaagaacatcatatgtaatggtctgtctgacggcattgttataggagagaaa ggcaaagggagcatagaaaacaatgttatctcagggaatgcgggttgtggtgtatggataactgccgcatgtcagccgat gatccatggtaaccaaataaacggaaatggtgatactggtataacgtttgtaaacaaaacaatgttaaactttctgatcg acaacatttttgtggtgtttggagggaaggtcttccagcaaattgtcggaattccaatggggaccaattgtgccccactc cttgccgacattttcctttactcatacgaagctgaattcattcaatctttggtctctgaagagaaaagatacttagcttc tgacttcaacttcacttacagatacatagacaatgtgttgtccatcaataatccaaaattcgcggattaccccagcagta tctatccttcggagcttgaagtcaaagaaactacagagacaaataattcagcatcctatttggacataaggttgtcttac gacactaatggtcacatgaacacctcactctatgacaaacgtgacgacttcaatttcagcattacaaactttccttttct gagtagcaacatcccttcatcgcctgcttatggcgtgttcntctcactcccatatcgggagttcgcttcttttcatgtgg tggagcatctatacacagagccgatgtttaagggcctcaataccacttttaaagaactcttgatcttgactggtcagaaa gccatctactgcatcgtcggactgatagtgggtgccagaaatggctgctttcaggttttgaaatag |
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Protein
| Protein ID | pfu_aug2.0_138.1_26914.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_138.1_26914.t1 MVRDQASWCSEAGGVKSGITRFTRTKRLECIFCTGEIPLSHNTIMGNHWGGVDIRHAGDPVITKNIICNGLSDGIVIGEK GKGSIENNVISGNAGCGVWITAACQPMIHGNQINGNGDTGITFVNKTMLNFLIDNIFVVFGGKVFQQIVGIPMGTNCAPL LADIFLYSYEAEFIQSLVSEEKRYLASDFNFTYRYIDNVLSINNPKFADYPSSIYPSELEVKETTETNNSASYLDIRLSY DTNGHMNTSLYDKRDDFNFSITNFPFLSSNIPSSPAYGVFXSLPYREFASFHVVEHLYTEPMFKGLNTTFKELLILTGQK AIYCIVGLIVGARNGCFQVLK |
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