Gene
| Gene Model ID | pfu_aug2.0_138.1_26916 |
|---|---|
| Locus | scaffold138.1 : 150794 ... 166025 : - |
| To GenomeBrowser | scaffold138.1:150794..166025 |
| Genes list of scaffold | scaffold138.1 |
| Synonym | pfu_aug1.0_13783.1_18035 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_138.1_26916.t1 | 1 | 1 | hGDE_N | 30 | 120 | 5.1e-20 | 71.1 | 2.8e-23 | 1.0e-19 | 70.1 |
| pfu_aug2.0_138.1_26916.t1 | 1 | 1 | hDGE_amylase | 140 | 456 | 0.0 | 304.8 | 0.0 | 0.0 | 304.2 |
| pfu_aug2.0_138.1_26916.t1 | 1 | 1 | hGDE_central | 571 | 847 | 0.0 | 281.0 | 0.0 | 0.0 | 280.4 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_138.1_26916.t1 | gi|642933867|ref|XP_008197545.1| | PREDICTED: glycogen debranching enzyme [Tribolium castaneum] | 0.0 |
| pfu_aug2.0_138.1_26916.t1 | gi|752871694|ref|XP_011253057.1| | PREDICTED: glycogen debranching enzyme isoform X3 [Camponotus floridanus] | 0.0 |
Transcript
| Transcript ID | pfu_aug2.0_138.1_26916.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_138.1_26916.t1 atgcctgtaaagcaagttcgagttctgacgcttgatggtggagcaaacaatgagcacatcttgtataaactacagaaagg ttgggttttaagatttgccttaggcccaactttacaagccagcccagtacgcattttctgcaatcatccaaagaaaggag atgtattcaagcgtgacgtttaccaagaagttcactggaaatgtccaacagagtctaaggttgacagacatgatgtttat gcggagatcaacatctacatagcgggttctttcaagtactatttcactgcagatggaagttctgtgcagagaaattgcga tggacaggggtattttctagtggatcctaaaatttcttttacaccaatggatgaaaggaatagagatgatgaagacgatg atgaagatgatgatgatgagttgacattagactgtattcagtgccagactgtcctcacaaagcttcttggaccatttgac caatgggaaggaagattacaagttgccatggaaactggttacaatatgatccatttcacccccattcaagaattaggaca gtctaattctgcatactcattacgggatcagttacatcttagtccggtttacagtcctggtgacaaaaagtatgactatg aagatgtggaagcccttgtcaagaaaatggccaaagaatggaaggtcctttcactgacagatttggtttacaatcatacg gcgaatgactcaccatggttaaaggagcatcctgaatgtggatacaatcttcagaactcaccatatctaaagcctgccta cttagttgactgtatactcagacatttcagtttagatgtcggaggaggaaagttcacacataggggattaccccatatag tggacagtaatcaacacttagagatgatgtcccatattcttccagaaatttttggacaacatagaatgcatgaattttat actgtagatgtgaatgcagttgtaaaagacttccgtagagcaattctagagaatagacaaatacacgttaccaagccttt tctggaaattatccaagatccagaattccgtcgcaacatgagtacagtagatatggacacagccttaaggatatataata cagatagaccaggtgttacaagcagagatgagagaatcaaggcttgctgtgaagaattcaggaagaagttagaggaactt aatcagcgtaaaatgtcagagttggctggacacatagaagttgccatatctaattttattgccaatgctaaatatagatt tgtggacggccatggtcctagatatggagaggtcacagagaagaatccattgatgtacaattactttgtggcaccagatg aggccttgagtgctcatgactcgcatgaactgggacgtcttgttcacaaatttggtggaacatctgtaggatcgtttatt cagccaagagttcgcccccttcttccttgtacagctcatgctttgttctttgatcaaactcatgataatgaaagtccagt tgagaaaagatcagtgtatgacatgttcccttcggcagccttagtatctatggcatgctgtgcttcaggtagtaacagag gctatgaccagctggtacctcatcatatacacgttgttaccgaggacaggctgtatccatcatggtgtacctgggatcta cccaactcctcacacatgaataaaacgtttggtattacagagggaaagaggtacctgaatagacttcactataacctagg caaaaatggattcacagaggtgtttgtagatcagctgagccatgacacggtagccgtgaccagacataatccactgtcac atgactctgtattaatgatagcgagaacagctttcaataaaccagacaatcctaaccatgtgtatcagatcaggccagta actgtggaaggacaggtagaagaggtattatttgaagccagtttccaggagaccaagggttatgattatgtaaagaatga ggagtatatcaacggactaccaaactactgcttaacaagcagggagaatctcagaccagagcagagtcagattgttcaaa cttatctgtcggagaacgataaccgcactcaggttgtctgcacccaacttactcctggaagtgttgtgattctcagaaca agtctacatcagaaagccaaagatgcgatcaaggatgtgcgacagagagtcagtcagtttggttatctaatgaggtctta cagtggtaggaccatgtttgatgagaattttgacaagtctaacttccattccattgtgtccagactgtcattttcagatc ttaacagggtgctatataggtgtgattctgaagagagggctgatgggaatggatttggatcgtatgatgtgccgggttgt ggagcatttgtttactgtggtttaagaggagttttatccatgcttggtgagattaggcctaagaatgatctaggacatcc actgtgtaacaatctgagggaaggagactggctaccggcgtacatagcaaatagacttaaagttcatcctagcacagctg atcttggtaactggtttgagcagatattctctagtctaaaacatgtacctcgattcctgattccctgctattttgatgct attatggcaggagcttatgtggtcatcagaaatcatgctcttcaactgatgtcagactttgttagagatgggtcatcatt tgcccaatacttggctatggggtcggtagaattctgtggttttgtagcagatgccaagcttccacagttgtccccaaaca tcaaacaacccaagccacctacagtggaggatcctagtaaagacggagaaggcatgatggaagctactctttccttggca gcgggcgacgaattcagagaggccaatacggcgttccgagcagcgctagcagaactaaaaagggaagggaaagggagtac agaacaccacactgttataagtgaaacagaccttcaatcgctttacaattctaagttcatgagccctaacacaccttccg gtctccaaaataagactatgtaa |
|
Protein
| Protein ID | pfu_aug2.0_138.1_26916.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_138.1_26916.t1 MPVKQVRVLTLDGGANNEHILYKLQKGWVLRFALGPTLQASPVRIFCNHPKKGDVFKRDVYQEVHWKCPTESKVDRHDVY AEINIYIAGSFKYYFTADGSSVQRNCDGQGYFLVDPKISFTPMDERNRDDEDDDEDDDDELTLDCIQCQTVLTKLLGPFD QWEGRLQVAMETGYNMIHFTPIQELGQSNSAYSLRDQLHLSPVYSPGDKKYDYEDVEALVKKMAKEWKVLSLTDLVYNHT ANDSPWLKEHPECGYNLQNSPYLKPAYLVDCILRHFSLDVGGGKFTHRGLPHIVDSNQHLEMMSHILPEIFGQHRMHEFY TVDVNAVVKDFRRAILENRQIHVTKPFLEIIQDPEFRRNMSTVDMDTALRIYNTDRPGVTSRDERIKACCEEFRKKLEEL NQRKMSELAGHIEVAISNFIANAKYRFVDGHGPRYGEVTEKNPLMYNYFVAPDEALSAHDSHELGRLVHKFGGTSVGSFI QPRVRPLLPCTAHALFFDQTHDNESPVEKRSVYDMFPSAALVSMACCASGSNRGYDQLVPHHIHVVTEDRLYPSWCTWDL PNSSHMNKTFGITEGKRYLNRLHYNLGKNGFTEVFVDQLSHDTVAVTRHNPLSHDSVLMIARTAFNKPDNPNHVYQIRPV TVEGQVEEVLFEASFQETKGYDYVKNEEYINGLPNYCLTSRENLRPEQSQIVQTYLSENDNRTQVVCTQLTPGSVVILRT SLHQKAKDAIKDVRQRVSQFGYLMRSYSGRTMFDENFDKSNFHSIVSRLSFSDLNRVLYRCDSEERADGNGFGSYDVPGC GAFVYCGLRGVLSMLGEIRPKNDLGHPLCNNLREGDWLPAYIANRLKVHPSTADLGNWFEQIFSSLKHVPRFLIPCYFDA IMAGAYVVIRNHALQLMSDFVRDGSSFAQYLAMGSVEFCGFVADAKLPQLSPNIKQPKPPTVEDPSKDGEGMMEATLSLA AGDEFREANTAFRAALAELKREGKGSTEHHTVISETDLQSLYNSKFMSPNTPSGLQNKTM |
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