Gene
| Gene Model ID | pfu_aug2.0_138.1_26917 |
|---|---|
| Locus | scaffold138.1 : 167226 ... 183279 : + |
| To GenomeBrowser | scaffold138.1:167226..183279 |
| Genes list of scaffold | scaffold138.1 |
| Synonym | pfu_aug1.0_293692.1_50322 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_138.1_26917.t1 | 2 | 1 | DUF572 | 42 | 151 | 0.0 | 197.8 | 0.0 | 0.0 | 167.6 |
| pfu_aug2.0_138.1_26917.t1 | 2 | 2 | DUF572 | 159 | 348 | 0.0 | 197.8 | 5.4e-13 | 4.0e-09 | 36.1 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_138.1_26917.t1 | gi|676457871|ref|XP_009054791.1| | hypothetical protein LOTGIDRAFT_161207 [Lottia gigantea] | 0.0 |
| pfu_aug2.0_138.1_26917.t1 | gi|556972293|ref|XP_005994376.1| | PREDICTED: coiled-coil domain-containing protein 130-like isoform X1 [Latimeria chalumnae] | 0.0 |
| pfu_aug2.0_138.1_26917.t1 | gi|585649440|ref|XP_006814388.1| | PREDICTED: coiled-coil domain-containing protein 130-like [Saccoglossus kowalevskii] | 0.0 |
| pfu_aug2.0_138.1_26917.t1 | gi|602638163|ref|XP_007425913.1| | PREDICTED: coiled-coil domain-containing protein 130 [Python bivittatus] | 0.0 |
| pfu_aug2.0_138.1_26917.t1 | gi|557280979|ref|XP_006023466.1| | PREDICTED: coiled-coil domain-containing protein 130 isoform X1 [Alligator sinensis] | 0.0 |
Transcript
| Transcript ID | pfu_aug2.0_138.1_26917.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_138.1_26917.t1 atgtgtttctcggataattggtctgaaaaagtgtcaagttttatcgttcgcattttcggagaatacgtagaacgacggca agatttgcgagatttgcagaggcttatttctgaggagtttgaaatggcagaaagaaaatctcagaacaagtattacccac cagactgggacccgagtaaaggatcagttaacaaatatgtgggtcaacatcctctcagagacagggctaaaaagatcaaa caaggcattcttgtcatcagatttgagatgccatacaacatttggtgtggaggttgtaatagtcatattggtatgggagt ccgatacaatgctgagaagaagaaagttggtaattactacaccactcctatatggatgtttaggatgaagtgccatcttt gtgacaactattttgaaattcaaacagatcctaagaaccatgattatgtcatactcagacctagtacatacaaagctact cagaaaaagatggctactgatgccatgttcaagctggagcatggatcagatgataagaaaaaaggtaaaaccactgtagc ttcactgggagaaatggaggaacggaggggacagttcaaagatgattacttactcaacaagctagcaagagaaaaattcc ggaatgagaagaaagctttgaaggtgaaagagacagaagacaaagatctcctagctaaatcctcacttgacattccgttg gttgaagagagtgatgaggatatacgattggctggattattgaagtatagctccacagaatcttatgacaaaaagcagtt agagaaaaggaaagaaatagaagccagacctttgtttgatcaaggaagtggaggtagtccaactacaaaagcagaattat taaggaagcagatttccacgtcaaagagtaaacctagccctttcgacaatgtccatattacatcaaaaacattggcgctt agtaataagttactcgggatcagaagaagaaaggaaaacagaagcaaattatcaaaaggaaagggtcaattagacttaat accagaagagaaagactctgtaatggaaagtgaaaaatgtgagtttccaaacagaagcatgacagatagtaacttacaca taaatgagacttga |
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Protein
| Protein ID | pfu_aug2.0_138.1_26917.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_138.1_26917.t1 MCFSDNWSEKVSSFIVRIFGEYVERRQDLRDLQRLISEEFEMAERKSQNKYYPPDWDPSKGSVNKYVGQHPLRDRAKKIK QGILVIRFEMPYNIWCGGCNSHIGMGVRYNAEKKKVGNYYTTPIWMFRMKCHLCDNYFEIQTDPKNHDYVILRPSTYKAT QKKMATDAMFKLEHGSDDKKKGKTTVASLGEMEERRGQFKDDYLLNKLAREKFRNEKKALKVKETEDKDLLAKSSLDIPL VEESDEDIRLAGLLKYSSTESYDKKQLEKRKEIEARPLFDQGSGGSPTTKAELLRKQISTSKSKPSPFDNVHITSKTLAL SNKLLGIRRRKENRSKLSKGKGQLDLIPEEKDSVMESEKCEFPNRSMTDSNLHINET |
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