Gene
| Gene Model ID | pfu_aug2.0_138.1_26919 |
|---|---|
| Locus | scaffold138.1 : 217511 ... 226889 : + |
| To GenomeBrowser | scaffold138.1:217511..226889 |
| Genes list of scaffold | scaffold138.1 |
| Synonym | pfu_aug1.0_85211.1_06042 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_138.1_26919.t1 | 7 | 1 | WD40 | 86 | 165 | 3.1e-18 | 64.9 | 8.2e-08 | 0.00031 | 20.5 |
| pfu_aug2.0_138.1_26919.t1 | 7 | 2 | WD40 | 183 | 200 | 3.1e-18 | 64.9 | 0.055 | 200.0 | 2.0 |
| pfu_aug2.0_138.1_26919.t1 | 7 | 3 | WD40 | 222 | 242 | 3.1e-18 | 64.9 | 0.42 | 1500.0 | -0.8 |
| pfu_aug2.0_138.1_26919.t1 | 7 | 4 | WD40 | 253 | 288 | 3.1e-18 | 64.9 | 9.0e-09 | 3.3e-05 | 23.5 |
| pfu_aug2.0_138.1_26919.t1 | 7 | 5 | WD40 | 306 | 327 | 3.1e-18 | 64.9 | 0.062 | 230.0 | 1.8 |
| pfu_aug2.0_138.1_26919.t1 | 7 | 6 | WD40 | 348 | 367 | 3.1e-18 | 64.9 | 0.47 | 1700.0 | -0.9 |
| pfu_aug2.0_138.1_26919.t1 | 7 | 7 | WD40 | 383 | 416 | 3.1e-18 | 64.9 | 5.7e-06 | 0.021 | 14.6 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_138.1_26919.t1 | gi|524902452|ref|XP_005107476.1| | PREDICTED: WD repeat-containing protein 65-like [Aplysia californica] | 0.0 |
| pfu_aug2.0_138.1_26919.t1 | gi|585722997|ref|XP_006813560.1| | PREDICTED: WD repeat-containing protein 65-like [Saccoglossus kowalevskii] | 0.0 |
| pfu_aug2.0_138.1_26919.t1 | gi|573894445|ref|XP_006634972.1| | PREDICTED: WD repeat-containing protein 65-like [Lepisosteus oculatus] | 0.0 |
| pfu_aug2.0_138.1_26919.t1 | gi|632940367|ref|XP_007885280.1| | PREDICTED: WD repeat-containing protein 65 [Callorhinchus milii] | 0.0 |
| pfu_aug2.0_138.1_26919.t1 | gi|512837570|ref|XP_002931652.2| | PREDICTED: cilia- and flagella-associated protein 57 [Xenopus (Silurana) tropicalis] | 0.0 |
Transcript
| Transcript ID | pfu_aug2.0_138.1_26919.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_138.1_26919.t1 atgtcgattgctgtggcaatggcccggcacatctttggcttaaagaaaactggtgatgaggagggtgatattcagaccat cattccacaagtgacagccatagtgtcatactccaagggctttgcctgtgcatgcggacctggaacagtacacctctttg aaaagactgatgacaaagatttcttcaaaaagaccagagaaatcaaaattccaccagacagtaacagtgctgacccagct aacgcccagagacagacaatcacatgtctgactgtaagtccgtctgaggaaacactagtggctagtactgaccacagtca actttactacatcacattgccaagtgctgacttaggaaagagtgaaggtgaccagattcacttcgaaactttggcacaat ctttccacaatggacaaattcttggattagatgtttgtatcaggaaaccattgattgctacatgttcatcagacaaatcc gtcaggatatggaactatgaaacttgtaacctggagttgtacagagagtttcctgaggaagcacagagcatcgcactgca tccatctggtctgtacatcctggtaggattcagcgacaaactacgtctgatgaatctgcttatagatgacattagaacat tcaaagaattccagccaagacaatgtagagagtgtgcattcagcaatggtggacatttgtttgctgccgtcaccagtaac attattcagatttattccaccactacgtttgagaatattgctaacctgaaaggtcataatggaagggtcaagtctattgt atggtttgctgatgacagtaagattgtctcctgtggtatggacggagctatttatgagtgggatccatacacaggaaagc ggacgggagattgtgtattgaagtcctgtagttatactggtgtagcgacatctccagatggaaagacaactttcgctgtt gggtctgataagacattgaaagaaatcaccctgacagaatcaaatgtgttaagacagattgactcccaggagacagtgct aagcagtatcgccatgtcacattccggccgtatgttgtttgctggtaccgttaaaggaacattatggtctctcaaattcc ctctaaataccccaggtgaatggacggaacatcaggggcatggaaccgccatcacaaagatgaagataacatatgatgac cagtacctgatcacagtggctgaggatgcctccattgtcttgtggaagatccaggataaggatgggcgtggtcttaaacg ggacaaggattttggctgggcagaggaaatcctcatcacaaagagtgaccttgaagaaaagaataccatgatgagtgatc ttaaaacaagagtggaggagctgaaatctgagaatgagtaccaactgagactgaaagacatgagttacaatgacaagatt aaggaacttacagaaaaatttatccaggaaatggaagcattgaaaaccaagaatcaggtgctgaaaacagaaaaagacaa agaggaagcgaaacatgaggaagaaatgcaggaagtgatggataaacacatcaaagagcttcaagatcttgaatctgcca ataaccagaagctgatgttggagtacgagaaattccaggaaatgcagagtaagatgatgaagatgcaggaagagtatgaa atcaaactggcagagaaggaagagagtaagatgaaggacatggagaggcagacagagtactacgagaccaaactaaagga gaaaatacaacaattagaacagttgaatgacgagtctcgagaacagaacaaagaatacgaggagacaaagaaacagattg aggaggatgctgacagagaaatcctggatatcaagaataattacgagatccaactgagaagagaaagggaagaaaatctt aaactgaagggagaaacaggcattatgaagaagaagttcttgagtcaacagagagagattgatgaccacaaagaagaaat caagaaataccaacaggatgtggccaaactaaacacagagaaagagaagatgaagaaagatatccagggtctcagaaaag aaattgtggaaagagatgacaccatccaagataaagaaaagagaatctatgatctcaagaagaagaatcaagaacttgag aaattcaagtttgtattggattacaaaatcaaggagctgaagaaacagattgagcccagggaaaatgacatcaaagctca gaaagacaccattcaatctatggagagtgaactggatagattctccaagcagaatacacagctagagctcagcatcaagg agttgacacagaaactcaaggctactgataaggaaatgcatttggaaagagaaaaggtgcatgatatcaaggccaaactg aagcagttcaagacagatctacacaattgtgtgggctacatccaggatccaaagatgctgaaggagacgataaaggcact ctatgccaaacacgtcagagacgacatcggtgagtcagctaatgttgatgcagacatccagaaggagtatagcagacagc gggaacacttggagagatcagtagcgtcactcaggaaaaagctgtcaaaggattctgaaatccacagagctgataatgtc aggatcatgcaggaaaatgtatccctaatcaaagaaatcaacgatcttcgtcgcgagttgaagattgctagaactcaaat ccacgatttggaggcagcaatgggtctccatagtaagaagaacaaacaggagggagctaccattgctatgtttacaacta aaggacctagtgctctagtacaaactgatttggaagaaaaagagaaaattatagaaatgcagaaattagaaatgggaagg ttacgacaacaaatgcaggagttggaattaggaatgggttcaagacctccctctggacagaaattacaaccaatcgaatc caccgcatga |
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Protein
| Protein ID | pfu_aug2.0_138.1_26919.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_138.1_26919.t1 MSIAVAMARHIFGLKKTGDEEGDIQTIIPQVTAIVSYSKGFACACGPGTVHLFEKTDDKDFFKKTREIKIPPDSNSADPA NAQRQTITCLTVSPSEETLVASTDHSQLYYITLPSADLGKSEGDQIHFETLAQSFHNGQILGLDVCIRKPLIATCSSDKS VRIWNYETCNLELYREFPEEAQSIALHPSGLYILVGFSDKLRLMNLLIDDIRTFKEFQPRQCRECAFSNGGHLFAAVTSN IIQIYSTTTFENIANLKGHNGRVKSIVWFADDSKIVSCGMDGAIYEWDPYTGKRTGDCVLKSCSYTGVATSPDGKTTFAV GSDKTLKEITLTESNVLRQIDSQETVLSSIAMSHSGRMLFAGTVKGTLWSLKFPLNTPGEWTEHQGHGTAITKMKITYDD QYLITVAEDASIVLWKIQDKDGRGLKRDKDFGWAEEILITKSDLEEKNTMMSDLKTRVEELKSENEYQLRLKDMSYNDKI KELTEKFIQEMEALKTKNQVLKTEKDKEEAKHEEEMQEVMDKHIKELQDLESANNQKLMLEYEKFQEMQSKMMKMQEEYE IKLAEKEESKMKDMERQTEYYETKLKEKIQQLEQLNDESREQNKEYEETKKQIEEDADREILDIKNNYEIQLRREREENL KLKGETGIMKKKFLSQQREIDDHKEEIKKYQQDVAKLNTEKEKMKKDIQGLRKEIVERDDTIQDKEKRIYDLKKKNQELE KFKFVLDYKIKELKKQIEPRENDIKAQKDTIQSMESELDRFSKQNTQLELSIKELTQKLKATDKEMHLEREKVHDIKAKL KQFKTDLHNCVGYIQDPKMLKETIKALYAKHVRDDIGESANVDADIQKEYSRQREHLERSVASLRKKLSKDSEIHRADNV RIMQENVSLIKEINDLRRELKIARTQIHDLEAAMGLHSKKNKQEGATIAMFTTKGPSALVQTDLEEKEKIIEMQKLEMGR LRQQMQELELGMGSRPPSGQKLQPIESTA |
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