Gene
| Gene Model ID | pfu_aug2.0_138.1_26927 |
|---|---|
| Locus | scaffold138.1 : 326461 ... 340947 : + |
| To GenomeBrowser | scaffold138.1:326461..340947 |
| Genes list of scaffold | scaffold138.1 |
| Synonym | pfu_aug1.0_57381.1_41675 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_138.1_26927.t1 | 4 | 1 | Fasciclin | 194 | 336 | 0.0 | 376.8 | 2.1e-25 | 1.5e-21 | 76.6 |
| pfu_aug2.0_138.1_26927.t1 | 4 | 2 | Fasciclin | 350 | 471 | 0.0 | 376.8 | 1.4e-34 | 1.0e-30 | 106.3 |
| pfu_aug2.0_138.1_26927.t1 | 4 | 3 | Fasciclin | 485 | 613 | 0.0 | 376.8 | 7.2e-28 | 5.3e-24 | 84.6 |
| pfu_aug2.0_138.1_26927.t1 | 4 | 4 | Fasciclin | 627 | 752 | 0.0 | 376.8 | 6.9e-34 | 5.1e-30 | 104.0 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_138.1_26927.t1 | gi|676422237|ref|XP_009043931.1| | hypothetical protein LOTGIDRAFT_208417 [Lottia gigantea] | 0.0 |
| pfu_aug2.0_138.1_26927.t1 | gi|325296986|ref|NP_001191507.1| | fasciclin-like protein precursor [Aplysia californica] | 0.0 |
| pfu_aug2.0_138.1_26927.t1 | gi|260803573|ref|XP_002596664.1| | hypothetical protein BRAFLDRAFT_122040 [Branchiostoma floridae] | 0.0 |
| pfu_aug2.0_138.1_26927.t1 | gi|585643870|ref|XP_006811438.1| | PREDICTED: transforming growth factor-beta-induced protein ig-h3-like [Saccoglossus kowalevskii] | 0.0 |
| pfu_aug2.0_138.1_26927.t1 | gi|91095131|ref|XP_971500.1| | PREDICTED: transforming growth factor-beta-induced protein ig-h3 [Tribolium castaneum] | 0.0 |
Transcript
| Transcript ID | pfu_aug2.0_138.1_26927.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_138.1_26927.t1 atgcgcaaacatcttccacgaagctatggtagcaactggaacagatcttacagatggatgtttgactttggtagacaacg aaactggtatgatggtcccaatgtatgtacccacaagacagagacaaatgacacggtgtcttatggaaacagttttggta aacacagtgaagtaaggaccacaatctgtgacgacaggggatcggcatatagatgtgaatatagacatcttccacgaggc tatggtagggactggaacagatcttacagatggatgtttgactttggtaggcaaagaaattggtatgatggtcccaatgt atgtacccacaagacagagacaaataacacagtgtctgatggaaacagttttggtaaacacagtgaagtaaggaccacaa tctgtgacgacaggggatcggcatatagatgtgaatatagtataacaaaaggaggcattaaacagaaagttttggaggtc aaagaatgctgttttggattcagcaggagaatgggtgattatggatgccctacccctgtacggttgcagaatgttgtaca aacagctcgtgatctgaatttgaatgagctgataggagctttgcagacggtcaatttggatcgtgtcatcttggcgggaa atttcacagtttttgcgccaaccgatgaagcttttgccatgcttggtgaacaaccaatgcagagagacagatacatgaat gcaaatgatatgggatctgttgtcagggtttcaagaccaatggcagatcaagcggcggaggatctaagaaatatactcct gaatcatgttaccacaaaagtcctcacaactggccgtcttaatgatgaacagttaatagaaaccgctggccccaccaact caaagatcagagtcaacttctatgatggcaaagacaagttgatgacagccaattgtaagagagtgcgatcccaggataat cgagcgtctaacggagtgatacatattatagaggaagtgatgttaccagtcagtgactccatggtggacatcgtcaccaa agacagacaacttagttacctcaaaactgctattggcagatcaagtttaggacaagcactacgtgccgacggacaactga cattatttgctccgacagatgcagccttccagaagttagacagtaatgtacttaacagattactacgggaccagaaatgt ctagacaaggtactgaagaaccatgtgctgcctaacgttgtgtgctcctcagcgatacaaggaaaatcccggacaaagaa cctactgatgaggtacctatctgtgaacagagatcaggaagacaaggtgtttgtccaggattcccaagttgtatctgccg atatcatgacaactaacggtgtgatacatctgatagatgaagtactcattcctgatgatgctcttggtatactggatgta gcagagaaacagaatgccactaaagtactggagctgattgaccgggctggtctaaggaagacgctagaatcggcagaaaa catcacattctttgtacccacaaacgaggctgtggagaaactaccatcagatgtcctgacctctttagcacgggacacta atgccttggcaaatatcctaaaataccatgtgactcctgttgaaaccgagtgcaaatttgtttataatggatatgagtta gaaacactcagttctggaaagagtattgtgctctatgaatattcaacatttcccttcagacaaagatggctacagactgc acagtgtggtcgtataataatgggaaatattccttcctgtaatggtttgattcaccttgtagataaggtgttgatcccac ccgttggtaatattcttgatgttctggcccaggatcgcaggtttacacagttagttgaccttctaaagagggcggggcta gctgatgcactccagggagagggacctctcactatttttgctccaaccaatcaggcttttggtaagattcccagtagtac cttacagagtctggccagtgatgtggatcaactacaaactgtactcaaacttcatgtcatcaaaggcttcctatgctgtg ctggaatctttgaggacaactttttccatcgtaatagaatctcttctctggaaggaaccagacttcgtattcgtaaagaa ggtgatcagcttatggtacaaagctctacaatcagctcatgtgaccttacaggaaccaatggagtggtccatgccataga cagtgtaatattacccaatcaaaagcagcgtgacagatcatggtatggttattattacaactga |
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Protein
| Protein ID | pfu_aug2.0_138.1_26927.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_138.1_26927.t1 MRKHLPRSYGSNWNRSYRWMFDFGRQRNWYDGPNVCTHKTETNDTVSYGNSFGKHSEVRTTICDDRGSAYRCEYRHLPRG YGRDWNRSYRWMFDFGRQRNWYDGPNVCTHKTETNNTVSDGNSFGKHSEVRTTICDDRGSAYRCEYSITKGGIKQKVLEV KECCFGFSRRMGDYGCPTPVRLQNVVQTARDLNLNELIGALQTVNLDRVILAGNFTVFAPTDEAFAMLGEQPMQRDRYMN ANDMGSVVRVSRPMADQAAEDLRNILLNHVTTKVLTTGRLNDEQLIETAGPTNSKIRVNFYDGKDKLMTANCKRVRSQDN RASNGVIHIIEEVMLPVSDSMVDIVTKDRQLSYLKTAIGRSSLGQALRADGQLTLFAPTDAAFQKLDSNVLNRLLRDQKC LDKVLKNHVLPNVVCSSAIQGKSRTKNLLMRYLSVNRDQEDKVFVQDSQVVSADIMTTNGVIHLIDEVLIPDDALGILDV AEKQNATKVLELIDRAGLRKTLESAENITFFVPTNEAVEKLPSDVLTSLARDTNALANILKYHVTPVETECKFVYNGYEL ETLSSGKSIVLYEYSTFPFRQRWLQTAQCGRIIMGNIPSCNGLIHLVDKVLIPPVGNILDVLAQDRRFTQLVDLLKRAGL ADALQGEGPLTIFAPTNQAFGKIPSSTLQSLASDVDQLQTVLKLHVIKGFLCCAGIFEDNFFHRNRISSLEGTRLRIRKE GDQLMVQSSTISSCDLTGTNGVVHAIDSVILPNQKQRDRSWYGYYYN |
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