Gene
| Gene Model ID | pfu_aug2.0_138.1_26928 |
|---|---|
| Locus | scaffold138.1 : 342111 ... 347070 : - |
| To GenomeBrowser | scaffold138.1:342111..347070 |
| Genes list of scaffold | scaffold138.1 |
| Synonym | pfu_aug1.0_2783.1_01231 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_138.1_26928.t1 | 4 | 1 | LRR_8 | 34 | 45 | 1.3e-08 | 34.4 | 0.49 | 1200.0 | -0.7 |
| pfu_aug2.0_138.1_26928.t1 | 7 | 1 | LRR_1 | 34 | 48 | 4.6e-06 | 25.9 | 0.15 | 370.0 | 1.8 |
| pfu_aug2.0_138.1_26928.t1 | 4 | 1 | LRR_4 | 35 | 81 | 3.5e-14 | 52.0 | 5.3e-06 | 0.013 | 15.0 |
| pfu_aug2.0_138.1_26928.t1 | 4 | 2 | LRR_8 | 64 | 118 | 1.3e-08 | 34.4 | 9.9e-08 | 0.00024 | 20.7 |
| pfu_aug2.0_138.1_26928.t1 | 7 | 2 | LRR_1 | 64 | 80 | 4.6e-06 | 25.9 | 0.0027 | 6.6 | 7.1 |
| pfu_aug2.0_138.1_26928.t1 | 4 | 2 | LRR_4 | 86 | 118 | 3.5e-14 | 52.0 | 5.9e-07 | 0.0015 | 18.1 |
| pfu_aug2.0_138.1_26928.t1 | 7 | 3 | LRR_1 | 86 | 101 | 4.6e-06 | 25.9 | 0.00014 | 0.36 | 11.0 |
| pfu_aug2.0_138.1_26928.t1 | 4 | 3 | LRR_8 | 108 | 165 | 1.3e-08 | 34.4 | 5.6e-07 | 0.0014 | 18.3 |
| pfu_aug2.0_138.1_26928.t1 | 7 | 4 | LRR_1 | 108 | 117 | 4.6e-06 | 25.9 | 0.061 | 150.0 | 3.0 |
| pfu_aug2.0_138.1_26928.t1 | 7 | 5 | LRR_1 | 129 | 145 | 4.6e-06 | 25.9 | 0.0016 | 3.9 | 7.8 |
| pfu_aug2.0_138.1_26928.t1 | 4 | 3 | LRR_4 | 130 | 167 | 3.5e-14 | 52.0 | 8.7e-09 | 2.1e-05 | 23.9 |
| pfu_aug2.0_138.1_26928.t1 | 7 | 6 | LRR_1 | 155 | 166 | 4.6e-06 | 25.9 | 0.45 | 1100.0 | 0.3 |
| pfu_aug2.0_138.1_26928.t1 | 7 | 7 | LRR_1 | 202 | 217 | 4.6e-06 | 25.9 | 0.24 | 600.0 | 1.2 |
| pfu_aug2.0_138.1_26928.t1 | 4 | 4 | LRR_4 | 210 | 218 | 3.5e-14 | 52.0 | 0.76 | 1900.0 | -1.4 |
| pfu_aug2.0_138.1_26928.t1 | 4 | 4 | LRR_8 | 213 | 218 | 1.3e-08 | 34.4 | 1.3 | 3200.0 | -2.1 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_138.1_26928.t1 | gi|676457656|ref|XP_009054722.1| | hypothetical protein LOTGIDRAFT_232290 [Lottia gigantea] | 0.0 |
| pfu_aug2.0_138.1_26928.t1 | gi|585716773|ref|XP_006825583.1| | PREDICTED: leucine-rich repeat and IQ domain-containing protein 4-like [Saccoglossus kowalevskii] | 4.0e-34 |
| pfu_aug2.0_138.1_26928.t1 | gi|524898857|ref|XP_005105872.1| | PREDICTED: protein phosphatase 1 regulatory subunit 7-like [Aplysia californica] | 2.0e-32 |
| pfu_aug2.0_138.1_26928.t1 | gi|260830035|ref|XP_002609967.1| | hypothetical protein BRAFLDRAFT_124389 [Branchiostoma floridae] | 2.0e-31 |
| pfu_aug2.0_138.1_26928.t1 | gi|557296792|ref|XP_006030742.1| | PREDICTED: vasorin-like [Alligator sinensis] | 6.0e-22 |
Transcript
| Transcript ID | pfu_aug2.0_138.1_26928.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_138.1_26928.t1 atgacaaaaaatctgagccaggactttgtggaacgtcgattgcatccactgacacacctccctgaagcatggactgtaga tttgggaggaaaatactacgagttagacctaaagatgtgtcagcttcgatctttggattatgaattcagatggggagatg acagatttataggaatagaagttttaaagaaactttactcgctgaatttgtcacataacttcatagaccgtattgagtct ctggtaccaagctcatccctggtggagcttaatctgagtatgaataacctaacagacatatcctatatgccaagtatgat caatctacaaatactcaatgtcaacaacaataagagtgaccttattcccttgactagctgtttccacatacagatcctga atctggccagcaacaatatagtgacacttcacagtgcagtgggtgtacttggtcagcttaaacgtctggaagttctaaca ttgatgggaaatccagttgacagggacaagttctataggacagatatactaaagcaaacaaacatcatgaccttggataa catatcagttagaccattaccacggcaaccatctccaaagatagagctggacatgggtaacagtcggcacatacagaact tacactctctgaaggaagccgccaagcaagcgttccaggagcgaatgaaggaatcaaggttacagatggaggaaaacgtc aactttctacaacgcagaattgtgtaa |
|
Protein
| Protein ID | pfu_aug2.0_138.1_26928.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_138.1_26928.t1 MTKNLSQDFVERRLHPLTHLPEAWTVDLGGKYYELDLKMCQLRSLDYEFRWGDDRFIGIEVLKKLYSLNLSHNFIDRIES LVPSSSLVELNLSMNNLTDISYMPSMINLQILNVNNNKSDLIPLTSCFHIQILNLASNNIVTLHSAVGVLGQLKRLEVLT LMGNPVDRDKFYRTDILKQTNIMTLDNISVRPLPRQPSPKIELDMGNSRHIQNLHSLKEAAKQAFQERMKESRLQMEENV NFLQRRIV |
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