Gene
| Gene Model ID | pfu_aug2.0_138.1_26931 |
|---|---|
| Locus | scaffold138.1 : 454828 ... 471569 : - |
| To GenomeBrowser | scaffold138.1:454828..471569 |
| Genes list of scaffold | scaffold138.1 |
| Synonym | pfu_aug1.0_2751.1_15927 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_138.1_26931.t1 | 2 | 1 | BSMAP | 32 | 44 | 3.92364e-44 | 151.0 | 0.12 | 890.0 | -0.4 |
| pfu_aug2.0_138.1_26931.t1 | 2 | 2 | BSMAP | 57 | 264 | 3.92364e-44 | 151.0 | 0.0 | 3.92364e-44 | 151.0 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_138.1_26931.t1 | gi|524903270|ref|XP_005107840.1| | PREDICTED: transmembrane protein 59-like [Aplysia californica] | 0.0 |
| pfu_aug2.0_138.1_26931.t1 | gi|291236795|ref|XP_002738324.1| | PREDICTED: transmembrane protein 59-like [Saccoglossus kowalevskii] | 0.0 |
| pfu_aug2.0_138.1_26931.t1 | gi|573894123|ref|XP_006634812.1| | PREDICTED: transmembrane protein 59-like [Lepisosteus oculatus] | 0.0 |
| pfu_aug2.0_138.1_26931.t1 | gi|551500920|ref|XP_005802007.1| | PREDICTED: transmembrane protein 59-like [Xiphophorus maculatus] | 0.0 |
| pfu_aug2.0_138.1_26931.t1 | gi|348522024|ref|XP_003448526.1| | PREDICTED: transmembrane protein 59-like [Oreochromis niloticus] | 0.0 |
Transcript
| Transcript ID | pfu_aug2.0_138.1_26931.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_138.1_26931.t1 atggcgaaaatactacagcttctgacagttacatcaattttgttcgttgtccgcggtattggtgtgtttgacagggtttt agatgatatttcatcatgtgtagaagcttgttcaaatacgtatagtcctcatacatacgaaaagggatatttgttagacg cctgtaaacgaggatgtcgattcttttccatcatggaatttgtatactgtaaccataatagtctgaatttaactcaacag ggatgcaaagcatcatgtgaagaggcttacagtaacaaaacagatgaattagacagctgtaaatttggatgtaacagtca gattcctcatgttatacagcagcagaaggaggatgaacagtacgagcaaaatatccacatgttatatcctctaatgtaca tacataacgtctacagcaacatgattgataaaatgtaccagggtatgtctgtccgatggtctttctacatgcaagcagat aacggtaaagttgtagttatgaagacgcagcctcaactctatgctgaaattgacaatatggagtttgaagatgatctcaa cacagccaattatctagagacaaatctggaaccattcgacagatctgctacaccagacgttcaaaattctcagctgtcag gtttccatgacgactcagaagaattgtccctggatgccacagacagacggacatccagtgattggctgagctgtgtctct cgtaagacgggcattcctagggagctacttagtctccttctgttagccagtgctgtgatgatgatttggttgtgtttgtc tgccttggcaacctccccggatcactgggtcaaggctgaacctcagaaattgagtatcaatggtgatttagaatacctga gagaactggaaacaaaaggacttaaactatcctttccacaggagagcgaggaagcaggtccacttcccatcaaaatcaat gtgcacagaatttag |
|
Protein
| Protein ID | pfu_aug2.0_138.1_26931.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_138.1_26931.t1 MAKILQLLTVTSILFVVRGIGVFDRVLDDISSCVEACSNTYSPHTYEKGYLLDACKRGCRFFSIMEFVYCNHNSLNLTQQ GCKASCEEAYSNKTDELDSCKFGCNSQIPHVIQQQKEDEQYEQNIHMLYPLMYIHNVYSNMIDKMYQGMSVRWSFYMQAD NGKVVVMKTQPQLYAEIDNMEFEDDLNTANYLETNLEPFDRSATPDVQNSQLSGFHDDSEELSLDATDRRTSSDWLSCVS RKTGIPRELLSLLLLASAVMMIWLCLSALATSPDHWVKAEPQKLSINGDLEYLRELETKGLKLSFPQESEEAGPLPIKIN VHRI |
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