Genome browser

OIST Marine Genomics Unit since 2008

Gene
Gene Model IDpfu_aug2.0_1380.1_01590
Locus scaffold1380.1 : 132276 ... 146551 : +
To GenomeBrowser scaffold1380.1:132276..146551
Genes list of scaffold scaffold1380.1
Synonym pfu_aug1.0_1118.1_15361

Manual annotation
Blast Hit to nr / sp
query Subject ID Subject Name evalue
pfu_aug2.0_1380.1_01590.t1 gi|585691527|ref|XP_006821273.1| PREDICTED: uncharacterized protein LOC102806496, partial [Saccoglossus kowalevskii] 6.0e-39
pfu_aug2.0_1380.1_01590.t1 gi|585695818|ref|XP_006822093.1| PREDICTED: uncharacterized protein LOC102800980, partial [Saccoglossus kowalevskii] 2.0e-38
pfu_aug2.0_1380.1_01590.t1 gi|585711110|ref|XP_006824680.1| PREDICTED: uncharacterized protein LOC102803912, partial [Saccoglossus kowalevskii] 6.0e-35
pfu_aug2.0_1380.1_01590.t1 gi|585674437|ref|XP_006818608.1| PREDICTED: uncharacterized protein LOC100370766 [Saccoglossus kowalevskii] 3.0e-33
pfu_aug2.0_1380.1_01590.t1 gi|585707438|ref|XP_006823985.1| PREDICTED: uncharacterized protein LOC102804649 [Saccoglossus kowalevskii] 2.0e-31

Transcript
Transcript IDpfu_aug2.0_1380.1_01590.t1
Definition-
>pfu_aug2.0_1380.1_01590.t1
atgccagctcgggctcgaaagtcgactataaatttagagctggagtacgtgctccaacacagaggttataaaatgttgga
gcatgatgttcatcacttaaaactgaatcgttttataagtgtgtatgacaaaagagatggttttggatttaacatagtaa
atttcctctggcttgacggtgatgttcctagatttccgtcctatgatatatggacggtgtgctgtccatcagaggattgc
ttgagcggggtcaacccgttggagcttgaagtcaaggaggctgcggggacaaataatttagcatcctatttggacattat
tctgtcctatgacactgatggtcacatgaacacatcattctatgacaaacgtgacgacttcggtttcagcatggcagact
ttccttttctgagtagcaacatcccttcgtcgcctgcttatggcgtgttcatatcccaactaatacgttatgccagagta
aaaggtgacgttaaaagtaatctcaccgcgggttcagtttgcagcagcggcagggagccgagaacagatccagataaata
cggggcccaacacagtcacatacaccagagggaatttggaatctctatggaatcactacctgcactggatacagtgacaa
atatggataatgaccatatccctgtacatgctgtatacagcacaaaatcgataattcaaaaatcagaaaccgaaggcata
caaaatcaggacaaaacaggaaccaaagcaaacaaacaaaaacctccaccatatgaaaagaagcgaactcacgatatggg
agtgagaccaaacagcgacaacaaattataccaggatttcgcccgaaggatgacaatagagtggagaaaacacgacaact
ctttcaatcagataaagaaaccgatacatatggacgcaagcgaatgtttttctcgggcaaagaaatttgcaacaatttca
acggataacgaggatgtaaactgttcatgtgcaacaactcacatatatgtttggactgtaaaggagaccgttctcgtttg
tcgtgtccaaatgcaaaaaaaaaaacgggacagcttctcaggacagagctcttgttctgagaaagtaatgattagaggag
tttgtacgcccattaatgtagaaaaattagaagcttttcctcaaaaccatccagacagtccattttacaatatcgttttc
accctaccgcatcagcccaataggagtagcagaaggaaatattcagggaagaaaagtcttattgtcgatatgtcgtctcc
acacaacaataaaaacagtccaagtataaatgatcttatagtcaaagaagaatactccctacattacgtaaccattgacg
atgcaataaaggtgattgagcgcataggacaaggagcatggttaaagaagacggacattacagactcattcaaaactatt
cctgttcatccatcactatggccgtttcaaggaatacaatgggagaatcagtattacttatatacacagttagttttcgg
aagtcgttctagtccaaagatattcgattatctatcaaaagtagtgtgctga

Protein
Protein IDpfu_aug2.0_1380.1_01590.t1
Definition-
>pfu_aug2.0_1380.1_01590.t1
MPARARKSTINLELEYVLQHRGYKMLEHDVHHLKLNRFISVYDKRDGFGFNIVNFLWLDGDVPRFPSYDIWTVCCPSEDC
LSGVNPLELEVKEAAGTNNLASYLDIILSYDTDGHMNTSFYDKRDDFGFSMADFPFLSSNIPSSPAYGVFISQLIRYARV
KGDVKSNLTAGSVCSSGREPRTDPDKYGAQHSHIHQREFGISMESLPALDTVTNMDNDHIPVHAVYSTKSIIQKSETEGI
QNQDKTGTKANKQKPPPYEKKRTHDMGVRPNSDNKLYQDFARRMTIEWRKHDNSFNQIKKPIHMDASECFSRAKKFATIS
TDNEDVNCSCATTHIYVWTVKETVLVCRVQMQKKKRDSFSGQSSCSEKVMIRGVCTPINVEKLEAFPQNHPDSPFYNIVF
TLPHQPNRSSRRKYSGKKSLIVDMSSPHNNKNSPSINDLIVKEEYSLHYVTIDDAIKVIERIGQGAWLKKTDITDSFKTI
PVHPSLWPFQGIQWENQYYLYTQLVFGSRSSPKIFDYLSKVVC

  • MGU Home
  • Genome Projects
  • Information
  • Genome Browser
  • Blast Search
  • Keyword Search
  • Downloads

Gene ID:



Keyword:



  • Login

copyright © Marine Genomics Unit 2015
Okinawa Institute of Science and Technology
1919-1 Tancha, Onna-son, Kunigami-gun, Okinawa, Japan 904-0495