Gene
| Gene Model ID | pfu_aug2.0_1389.1_31656 |
|---|---|
| Locus | scaffold1389.1 : 35360 ... 63075 : - |
| To GenomeBrowser | scaffold1389.1:35360..63075 |
| Genes list of scaffold | scaffold1389.1 |
| Synonym | pfu_aug1.0_8391.1_60425 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_1389.1_31656.t1 | 1 | 1 | WW | 8 | 39 | 4.0e-07 | 29.7 | 3.2e-10 | 1.2e-06 | 28.2 |
| pfu_aug2.0_1389.1_31656.t1 | 3 | 1 | PIN_4 | 394 | 417 | 5.5e-30 | 104.1 | 2.1 | 7900.0 | -3.2 |
| pfu_aug2.0_1389.1_31656.t1 | 3 | 2 | PIN_4 | 796 | 934 | 5.5e-30 | 104.1 | 1.5e-33 | 5.5e-30 | 104.1 |
| pfu_aug2.0_1389.1_31656.t1 | 3 | 3 | PIN_4 | 1140 | 1159 | 5.5e-30 | 104.1 | 1.4 | 5300.0 | -2.6 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_1389.1_31656.t1 | gi|449666886|ref|XP_004206442.1| | 0.0 | |
| pfu_aug2.0_1389.1_31656.t1 | gi|632956075|ref|XP_007893780.1| | PREDICTED: transcriptional protein SWT1 isoform X2 [Callorhinchus milii] | 0.0 |
| pfu_aug2.0_1389.1_31656.t1 | gi|632956073|ref|XP_007893779.1| | PREDICTED: transcriptional protein SWT1 isoform X1 [Callorhinchus milii] | 0.0 |
| pfu_aug2.0_1389.1_31656.t1 | gi|585700432|ref|XP_006812785.1| | PREDICTED: uncharacterized protein LOC102807894 [Saccoglossus kowalevskii] | 0.0 |
| pfu_aug2.0_1389.1_31656.t1 | gi|676462963|ref|XP_009056441.1| | hypothetical protein LOTGIDRAFT_120307, partial [Lottia gigantea] | 0.0 |
Transcript
| Transcript ID | pfu_aug2.0_1389.1_31656.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_1389.1_31656.t1 atgaatcaccctaaacctaacttaccacatggctggatagtgaagcagagtaagacctaccccgatcgtgtctactactt taatgtacacactggatcatcaacatgggaggttccagcattactcaaatcgttcatcaaacagaggaaaagcaagacca ataatttagaacctccagtacatcagagcactcccaaagtcccagggtcctctagtacaggcactattaatagccatgag gcttctacagcaccaatgtaccatggtggtgaaattgttgccagattttccccagaagccaaattttcgcctgagttgga gggttcggatggtagtgccactcccgtgtatcaggatcctaacgattcggacgatgacctagatttagaatcagcccccc tcctacctcagagcaaccagcaatatcctgtgcatagtcaatttccgagtcacactttattacctctacagcatagttct catctacaagataataactcatattcacaactaccttctcatgttggacaacagcctggaaatgtacattttccgagtga cttttcaggttcatatggagctgggaaccattttccttcagggtatacccctgtctcaacgaatcccactccagtacaac atcccaatttttctatcaatcccatgtatcaccaatcatatccaccatcgattccaggtcaaccaaattcacaggaaatg ctgtctcctcacgatgcttttaacatgtacccaccacaaccaagcattcaaccgtccggttatcagtcatataatcctcc atctactttaggatcatctagttcacactcgctttataagcctatgtatgatgataaactgtcgggctcacaacccatgt caatgagttctttaagtggatggaataaggaaaaaggtgggaaaaagtccgtcagctttcacggaaaagacattgcaaca aagagtaaaactgatgtaactttggttgatgaaagttctactcaaacaactcagacaacgagtactattagaaactttct tgggccaaaaaaggttgtgaaaaagtctacacctgcaccgtcaaatagcaacaaaatcaaaattaccgacaaaaaatatt catcttcaagctcatgttcaaaggttgtcaatcctaatgaagaaaagaaaaatcaactgagtgacaagaaaaaagaggca attgcaaaagtggaggcaagacttgccaagagaaaagtagaggaggctaaagatgaaaaggaacttaagccgttagaaaa aagacggaaagttgcgcaagagaagagggcatatgtatcatcaacagctggatcagcgggtagtgacactgatacacgtc gcgttgtgcatcgtcaaatctcggaggaatctctggacatgacagatctgcctcattttcaggatccagagaaaatacgt cacatacagagttggatcgaccaatgggagcctaacgatcctcagctagactcgttcagtgatgccggcggtgaattaag ctctagcactaacaggacctctcctgactctataacgctgagcgtgtcttgttacagtgataatgacagtaggaagatcg tcgttaacaattaccctaataagacggaggacagtggtatatcttccataggagagcatagtggacatgtcctcaacaat ccatggaaagatctgcctcattttcaggatccagagaaaatacgtcacatacagagttggatcgaccaatgggagcctaa cgatcctcaactagactcgttcagtgatgccggcggtgaattgagctctagcactaacaggacctctcctgactctataa cgctgagcgtgtcttgttacagtgataatgacagtaggaagatcgtcgttaacaattaccctaataagacagaggacagt ggtatatcttccataggagagcatagtggacatgtcctcaacaatccatggaaagatgttcactcgtaccccccacctgt acaccatgtcagacatgtagaggagagcatggaggttgaggacatacatgtagtggagaatagggagatagaggacatgg atgtgnctactattctttcaatttgtttgtgttcaagcagtattcaactttcctgtcgggcaaactgttggttcttttgg ctaaaagaagtgaggcagcatgtactgaaaaatcctgaggaggtaagtaaatctcctaatgtactaaaaaatcctgaggg ggtaagtaaatctcctaatgtactgaaaaatcctgaggaggcaagtaaatctcataatgtactgaaaaatcctgcggagg ttacaggaactctgacagaactagtgaaagccaaaacaccagaggattcttatcagagtttggtgattgtcatcgacacg tgtgtgctgatcagtgatttaggctttgtacaggatctgcgtgaccaggacattcaaggttttggaaagccaacaatttt attaccatgggttgtcatgcaagaactagattcattgaaggattccaaatcccatgttaacctgtctttgactaccacaa agaaggcaagagatgctgtacatttcctgaatgataatttcacggagaaacatcccagggtcgtagggcagactccaata caggccaaggaggcggcagagatttttaggtctgagatgaatgacgacagaatactgcagtgttgtgtacagtgtcagaa acaaagatctaactctcagatagtactgctgtcaaacgatagaaacctctgctcaaaggctcacataatgggaatttctg cattctgtaggatgggctttttgtctggtatgcagaagttaaagaagacatcccaagacacagttgataagactaaagga aatgagaaacaatcagaaaagtctctcacatcaccaaccaatacactacaggattacaacaaggaagctatgttggatga catatactgtaaagtgaagtcattgctgaaggaatcgttagaaggaatgctagagagggagatggaaagggcctataaag atatatggctggagatagtactgaggaagcctccctggagtctacgagaccttatagaatgcattagaaagcactggata gcagtgtttggggatatactgaagagacgccatcattctaatatagagagactttggcaagcattcaggcactggatagc agtgtttggggatatactgaagagacgccatcattctaatatagagagactttggcaagcattcaggttctctaaaggtt ttgctgtcactgtggattcattaaaagaactgttatcagatgccatgccaatccttgaaagttaccacaatctggaaaaa aatgataaggtagtatctcagtccttaaagacgatgaggaaacttcaaactctgatacttgacatacagaaagggaacgt tcaagtcaagaaattagaggattatctagagtcgaagtcaacacaaaaggtcgaggctgaagtggatgatattcaaattg aaaatagcagcaaaatggcagagagggctcacatcaagctacgtgatatttgtacatgtgtggagtcattcattaacagt gttcatgagttcctgaagacgtataacagggcacgagatctggctcaactccagcaagtctatatgttgtatgagaaaat agtgccggcagtcacagatctacgatacatttactctagggaaatgatacacaagtcacatcagaagagatgcaagcttt attctcagcagcaaatcaaagggaagtcctaa |
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Protein
| Protein ID | pfu_aug2.0_1389.1_31656.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_1389.1_31656.t1 MNHPKPNLPHGWIVKQSKTYPDRVYYFNVHTGSSTWEVPALLKSFIKQRKSKTNNLEPPVHQSTPKVPGSSSTGTINSHE ASTAPMYHGGEIVARFSPEAKFSPELEGSDGSATPVYQDPNDSDDDLDLESAPLLPQSNQQYPVHSQFPSHTLLPLQHSS HLQDNNSYSQLPSHVGQQPGNVHFPSDFSGSYGAGNHFPSGYTPVSTNPTPVQHPNFSINPMYHQSYPPSIPGQPNSQEM LSPHDAFNMYPPQPSIQPSGYQSYNPPSTLGSSSSHSLYKPMYDDKLSGSQPMSMSSLSGWNKEKGGKKSVSFHGKDIAT KSKTDVTLVDESSTQTTQTTSTIRNFLGPKKVVKKSTPAPSNSNKIKITDKKYSSSSSCSKVVNPNEEKKNQLSDKKKEA IAKVEARLAKRKVEEAKDEKELKPLEKRRKVAQEKRAYVSSTAGSAGSDTDTRRVVHRQISEESLDMTDLPHFQDPEKIR HIQSWIDQWEPNDPQLDSFSDAGGELSSSTNRTSPDSITLSVSCYSDNDSRKIVVNNYPNKTEDSGISSIGEHSGHVLNN PWKDLPHFQDPEKIRHIQSWIDQWEPNDPQLDSFSDAGGELSSSTNRTSPDSITLSVSCYSDNDSRKIVVNNYPNKTEDS GISSIGEHSGHVLNNPWKDVHSYPPPVHHVRHVEESMEVEDIHVVENREIEDMDVXTILSICLCSSSIQLSCRANCWFFW LKEVRQHVLKNPEEVSKSPNVLKNPEGVSKSPNVLKNPEEASKSHNVLKNPAEVTGTLTELVKAKTPEDSYQSLVIVIDT CVLISDLGFVQDLRDQDIQGFGKPTILLPWVVMQELDSLKDSKSHVNLSLTTTKKARDAVHFLNDNFTEKHPRVVGQTPI QAKEAAEIFRSEMNDDRILQCCVQCQKQRSNSQIVLLSNDRNLCSKAHIMGISAFCRMGFLSGMQKLKKTSQDTVDKTKG NEKQSEKSLTSPTNTLQDYNKEAMLDDIYCKVKSLLKESLEGMLEREMERAYKDIWLEIVLRKPPWSLRDLIECIRKHWI AVFGDILKRRHHSNIERLWQAFRHWIAVFGDILKRRHHSNIERLWQAFRFSKGFAVTVDSLKELLSDAMPILESYHNLEK NDKVVSQSLKTMRKLQTLILDIQKGNVQVKKLEDYLESKSTQKVEAEVDDIQIENSSKMAERAHIKLRDICTCVESFINS VHEFLKTYNRARDLAQLQQVYMLYEKIVPAVTDLRYIYSREMIHKSHQKRCKLYSQQQIKGKS |
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