Gene
| Gene Model ID | pfu_aug2.0_1389.1_31659 |
|---|---|
| Locus | scaffold1389.1 : 105776 ... 115750 : + |
| To GenomeBrowser | scaffold1389.1:105776..115750 |
| Genes list of scaffold | scaffold1389.1 |
| Synonym | pfu_aug1.0_1177.1_65865 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_1389.1_31659.t1 | 1 | 1 | DUF4511 | 8 | 109 | 2.7e-38 | 129.8 | 2.20004e-42 | 3.3e-38 | 129.6 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_1389.1_31659.t1 | gi|676438174|ref|XP_009048443.1| | hypothetical protein LOTGIDRAFT_200624, partial [Lottia gigantea] | 0.0 |
| pfu_aug2.0_1389.1_31659.t1 | gi|524870243|ref|XP_005091907.1| | PREDICTED: protein C10-like [Aplysia californica] | 8.0e-40 |
| pfu_aug2.0_1389.1_31659.t1 | gi|241151381|ref|XP_002406656.1| | protein C10, putative [Ixodes scapularis] | 5.0e-30 |
| pfu_aug2.0_1389.1_31659.t1 | gi|746846939|ref|XP_011053826.1| | PREDICTED: protein C10 [Acromyrmex echinatior] | 1.0e-29 |
| pfu_aug2.0_1389.1_31659.t1 | gi|683897805|ref|XP_009100889.1| | PREDICTED: protein C10 [Serinus canaria] | 6.0e-29 |
Transcript
| Transcript ID | pfu_aug2.0_1389.1_31659.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_1389.1_31659.t1 atggcggcctccatgcaacaattttcagtccaagattgtaaatgtgccctgagtgacattttagaggcatttaagcagcc tgacaatcaccatcgtttggaggaagcccgtgacatggctggtaacgacatgctgagatccatgcagattgtgttccctg tagctacacagattcagatggacattattgacagatatggtttcccagctgatggtgatggtttaatacggtttactcaa gcagttaaggtatatgaaaaacaagacgaggagattgcacagttaaattacgaactgcgtactacgatgatacctgcatt aacggtacaggtgccaaatggtgaacaagatgggacctag |
|
Protein
| Protein ID | pfu_aug2.0_1389.1_31659.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_1389.1_31659.t1 MAASMQQFSVQDCKCALSDILEAFKQPDNHHRLEEARDMAGNDMLRSMQIVFPVATQIQMDIIDRYGFPADGDGLIRFTQ AVKVYEKQDEEIAQLNYELRTTMIPALTVQVPNGEQDGT |
|