Gene
| Gene Model ID | pfu_aug2.0_139.1_30271 |
|---|---|
| Locus | scaffold139.1 : 150416 ... 177148 : + |
| To GenomeBrowser | scaffold139.1:150416..177148 |
| Genes list of scaffold | scaffold139.1 |
| Synonym | pfu_aug1.0_7753.1_60290 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_139.1_30271.t1 | 3 | 1 | HMGL-like | 50 | 92 | 0.0 | 202.4 | 1.6 | 1400.0 | -1.3 |
| pfu_aug2.0_139.1_30271.t1 | 1 | 1 | CPSase_L_chain | 52 | 161 | 7.30006e-41 | 138.7 | 4.30199e-43 | 3.8e-40 | 136.4 |
| pfu_aug2.0_139.1_30271.t1 | 1 | 1 | ATPgrasp_Ter | 79 | 346 | 7.0e-14 | 51.3 | 2.3e-15 | 2.0e-12 | 46.5 |
| pfu_aug2.0_139.1_30271.t1 | 2 | 1 | Biotin_lipoyl | 157 | 172 | 6.8e-18 | 64.0 | 0.79 | 690.0 | -0.1 |
| pfu_aug2.0_139.1_30271.t1 | 1 | 1 | ATP-grasp_4 | 166 | 345 | 2.7e-18 | 66.3 | 6.2e-21 | 5.4e-18 | 65.3 |
| pfu_aug2.0_139.1_30271.t1 | 1 | 1 | CPSase_L_D2 | 167 | 360 | 0.0 | 240.4 | 0.0 | 0.0 | 239.5 |
| pfu_aug2.0_139.1_30271.t1 | 3 | 1 | Dala_Dala_lig_C | 195 | 343 | 1.2e-09 | 37.8 | 2.9e-11 | 2.5e-08 | 33.5 |
| pfu_aug2.0_139.1_30271.t1 | 3 | 2 | HMGL-like | 531 | 745 | 0.0 | 202.4 | 1.4e-31 | 1.2e-28 | 100.3 |
| pfu_aug2.0_139.1_30271.t1 | 2 | 1 | PYC_OADA | 786 | 979 | 0.0 | 467.9 | 0.0 | 0.0 | 228.3 |
| pfu_aug2.0_139.1_30271.t1 | 3 | 2 | Dala_Dala_lig_C | 941 | 971 | 1.2e-09 | 37.8 | 5.7 | 5000.0 | -3.4 |
| pfu_aug2.0_139.1_30271.t1 | 3 | 3 | HMGL-like | 986 | 1192 | 0.0 | 202.4 | 3.6e-31 | 3.2e-28 | 99.0 |
| pfu_aug2.0_139.1_30271.t1 | 2 | 2 | PYC_OADA | 1233 | 1433 | 0.0 | 467.9 | 0.0 | 0.0 | 238.3 |
| pfu_aug2.0_139.1_30271.t1 | 3 | 3 | Dala_Dala_lig_C | 1388 | 1436 | 1.2e-09 | 37.8 | 0.51 | 440.0 | 0.0 |
| pfu_aug2.0_139.1_30271.t1 | 2 | 2 | Biotin_lipoyl | 1484 | 1549 | 6.8e-18 | 64.0 | 2.2e-20 | 1.9e-17 | 62.6 |
| pfu_aug2.0_139.1_30271.t1 | 2 | 1 | Biotin_lipoyl_2 | 1484 | 1515 | 1.2e-07 | 31.2 | 1.1e-09 | 9.4e-07 | 28.4 |
| pfu_aug2.0_139.1_30271.t1 | 2 | 2 | Biotin_lipoyl_2 | 1521 | 1535 | 1.2e-07 | 31.2 | 1.7 | 1500.0 | -1.1 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_139.1_30271.t1 | gi|676458558|ref|XP_009055015.1| | hypothetical protein LOTGIDRAFT_232430 [Lottia gigantea] | 0.0 |
| pfu_aug2.0_139.1_30271.t1 | gi|157123846|ref|XP_001653941.1| | AAEL009691-PA [Aedes aegypti] | 0.0 |
| pfu_aug2.0_139.1_30271.t1 | gi|58390932|ref|XP_318078.2| | AGAP004742-PB [Anopheles gambiae str. PEST] | 0.0 |
| pfu_aug2.0_139.1_30271.t1 | gi|482683871|ref|XP_004444508.1| | GA13539, isoform B [Drosophila pseudoobscura pseudoobscura] | 0.0 |
| pfu_aug2.0_139.1_30271.t1 | gi|751777782|ref|XP_011197908.1| | PREDICTED: pyruvate carboxylase, mitochondrial isoform X2 [Bactrocera dorsalis] | 0.0 |
Transcript
| Transcript ID | pfu_aug2.0_139.1_30271.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_139.1_30271.t1 atgctgcgtttacaggcgcggctgtcgtcgctgtgccatggggccagggccaagatgccggatgctgcccgctctaagac tcagtatggctacaatctgcccccagggatgggacggtattcatcgtcacaaccccaggccaaacctgacgagaaaatcc aaaaacttctggtggctaatagaggtgagattgccattcgagtgttccgtgcatgcacggagatgaacattcggacagtg gctatatactcagagcaggacaagatgcatatgcataggcagaaagcagatgagtcatacctcatagggaaaggacttcc ccctgtagcagcgtatctcaacattccagaaatcatccaaattgctaaggagaatgacgtagatgcagtgcatcctgggt atggattcctgtccgagaggtcggattttgctgaggcgtgtaccgatgccggcatcaagtttataggaccttcagctgag gtcgtgtataaaatgggggacaaggtagaagctagaaaggctgccattgaagcaggtgtacaggtagtacctggtacaga tggaccagttgaggacgttgagcaggctcggtatttctgtgaacaatacggtcttcctgtgatatttaaggctgcctatg gagggggaggaagaggaatgaggattgtgaggaatatggaggacatagaggagaattttatgagagctaggtcagaagca gaggcagcatttggtaatggagctttgttcttagagaaattcatagaacgacctagacatatagaagtccaaattctagg tgacagatacggtgaggttgtgcatttgtatgagagagactgctctgtacaacggcgtcaccagaaggtcgtagaaattg ctccggcacccaaactctcaccagacatacgtgccaaaatgtgtgctgatgccaaacggctggccactcacgtaggctat gagaatgcagggacggtagaatttttactcgacaactctggccagtattatttcatcgaggtcaatgccagattacaagt agaacacacagtgacagaggaagttacagggtacgtactaggtgatgcttggtataggaagttaaagcaatacgcaagat tgcaaatacttctaaggaagaccaacataccattcttgctgaatgttctagaacatgagaagtttttaaatggagtggtt gacacatatttcatagacgaaaatccacaactcttcaaattttacccgagtaaaaacagagcccaaaaacttctccattt catgggccaaaccatggttaatggaccacagacaccactggccacaaacatggaaccatctgatgtcatacctacggtac cagatataccatatgtcaaaagtgctccacttggttggagagatgtactgaagaaggatggtcctgagggttttgccagg aaggtacgagatcacaagggactgcttctcatggatacgacattccgagatgctcatcaatcgctactggctactcgagt cagaacttacgatctgaagagaatatcaccctacgtcactcacaggttcaacaatctgttcagttgtgagaactggggag gagcgacatttgacgttgccatgcgttttctccacgagtgtccgtgggagaggttacagcagttacgagagcagatacct aatgtaccgttccagatgttactgagaggggctaatgccgtaggatacactaattacccagataatgtcgtatacaaatt ttgtgatttagctgtaaaacatggtatggacattttccgtatatttgactcgctcaattatttccctaacatcaaagttg gcatggaggctgtcggcaatgcaggtggtgttatcgaggcagccatatcatatactggtgacgtatcagaccccatggcc tctaagtatacattacagtactatgaggatctagccacagaactagtgaaagccggcacacacatcctgggtattaagga catggctggagtgttaaagccacgagctgccaaaatgttgattggagcactgagggacaggttcccagacatccccatcc atgtacatacacatgacacggcgtgtgccggagtggcatccatgctggcatgtgccgaagcaggtgccgatgttgtggat gttgccgtggattctatgtcaggattaacgtcacagcccagtatgggagccgttgtggcagcacttcagagaacagaact tgatacaggaatccagttatcagatgttacaaactattctgcatattgggaacagaccagaaacttgtacgctccgttcg aatgctgtaaaacactcaaaagtggaaattctgatgtatacatcaatgaaatcccaggtggacagtacactaacctacag ttccaagctttcagtctgggattggctgaccagtttgaagaagtcaagaagatgtatgctgaagccaataaactacttgg ggacgtgccaaaggtgaccccgtcatcaaaggtcgtaggtgacatggcacagtttatggtgcagaataaactgaatgcca aaatggtagaagagagagtggaggagttgtccttccctgtttcagttgtcgagtactttcagggatatctaggtcagcca ccagggggcttcccagaaccattacgtacaaagattttaaaaggaaaagagagaattgagggtcgtgctggtgaatcact cccaccaatagactttgaaggtctgaaggagagcctggaggaacgtcacgggaacatcattcgggaggtggacgtgatga gctcggcattgtatcctaaagtcacagatgatttcctagaattcagagagaagtacgggcctgtagatgctctggacacc aaaatgttttttgttggaccaaaaatggcacaagaagtagaggtaagattcagcagttgcggagccacatttgacgttgc catgcgttttctccatgagtgtccgtgggagaggttacagcagttacgagagcagatacctaatgtaccgttccagatgt tactgaggggggctaatgccgtaggatacactaactacccagataatgtcgtatacaaattttgtgatttagccgtaaaa catggtatggacattttccgtatatttgactcgctcaattatttccctaacatcaaagttggcatggaggctgttggcaa tgcaggtggtgttattgaggcagccatatcttatactggtgatgtatcagaccctatggcctctaagtatacattacagt actatgaggatctagccacagaactagtgaaggccggcacacacatcctgggtattaaggacatggctggagtgttaaag ccacgagcagccaaaatgttgattggagcactgagggacaggttcccagacatccccatccacgtacatacccatgacac ggcgtgtgcgggagtggcatccatgctggcatgtgccgaagcaggtgccgatgtagtggatgttgccgtggattctatgt cgggattaacgtcacagcccagtatgggagccgttgtggcagcacttcagagaacagaacttgatacaggaatccagtta tcagatgtgacaaactattctgcctattgggaacagaccagaaacttgtacgctccgttcgaatgctgtaaaacgctcaa aagtggaaactctgatgtatacatcaatgaaatcccaggtggacagtacactaacctacagttccaagctttcagtctgg gattggctgaccagtttgaagaagtcaagaagatgtatgctgaagcaaataaactactgggggacgtgccaaaggtgact ccatcatcaaaggtcgtgggtgacatggcccaatttatggtgcagaacaaactgaatgccaaaatggtagaagagagagt ggaggagttgtctttccctgtttctgttgtcgagtactttcaaggttatctaggtcagccaccagggggctttccagaac cattacgtacaaagattttgaaagggaaagaaagaatcgagggtcgagcaggtgagtctctcccaccaatagactttgaa gggctgaaggagagcctggaggaacgtcacgggaacatcattcgggaggtggacgtgatgagctcggcattgtatcctaa agtcacggatgatttcctagaattcagagagaagtatggacctgtagatgcactggacaccaaaatgttctttgttggac caaaaatggcacaagaagtagaggtaaccattgagaaaggaaaaactctatcaatcaaagctttagccgtgggagatctc agtaaggcagggaagcgggaagtattctttgagttaaacggtcagactagatctgtgtcaataactgacgaggcagcttc aaaggaattgcatttccatcctaaagctctaaaaggagtacgaggatcggttggtgcccccatgccaggtaccatagttg atatcaaggtaaaatctggtgacaaggtggagaaaggacagccactcctggtgctgagtgcaatgaaaatggagatgctg gtgacggcaccgtgtgccggaaccatcaaaaccatccatgtggaaaagagcatgaaaatggagggggacgatttgcttgt tgacatcgagtgtgaatag |
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Protein
| Protein ID | pfu_aug2.0_139.1_30271.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_139.1_30271.t1 MLRLQARLSSLCHGARAKMPDAARSKTQYGYNLPPGMGRYSSSQPQAKPDEKIQKLLVANRGEIAIRVFRACTEMNIRTV AIYSEQDKMHMHRQKADESYLIGKGLPPVAAYLNIPEIIQIAKENDVDAVHPGYGFLSERSDFAEACTDAGIKFIGPSAE VVYKMGDKVEARKAAIEAGVQVVPGTDGPVEDVEQARYFCEQYGLPVIFKAAYGGGGRGMRIVRNMEDIEENFMRARSEA EAAFGNGALFLEKFIERPRHIEVQILGDRYGEVVHLYERDCSVQRRHQKVVEIAPAPKLSPDIRAKMCADAKRLATHVGY ENAGTVEFLLDNSGQYYFIEVNARLQVEHTVTEEVTGYVLGDAWYRKLKQYARLQILLRKTNIPFLLNVLEHEKFLNGVV DTYFIDENPQLFKFYPSKNRAQKLLHFMGQTMVNGPQTPLATNMEPSDVIPTVPDIPYVKSAPLGWRDVLKKDGPEGFAR KVRDHKGLLLMDTTFRDAHQSLLATRVRTYDLKRISPYVTHRFNNLFSCENWGGATFDVAMRFLHECPWERLQQLREQIP NVPFQMLLRGANAVGYTNYPDNVVYKFCDLAVKHGMDIFRIFDSLNYFPNIKVGMEAVGNAGGVIEAAISYTGDVSDPMA SKYTLQYYEDLATELVKAGTHILGIKDMAGVLKPRAAKMLIGALRDRFPDIPIHVHTHDTACAGVASMLACAEAGADVVD VAVDSMSGLTSQPSMGAVVAALQRTELDTGIQLSDVTNYSAYWEQTRNLYAPFECCKTLKSGNSDVYINEIPGGQYTNLQ FQAFSLGLADQFEEVKKMYAEANKLLGDVPKVTPSSKVVGDMAQFMVQNKLNAKMVEERVEELSFPVSVVEYFQGYLGQP PGGFPEPLRTKILKGKERIEGRAGESLPPIDFEGLKESLEERHGNIIREVDVMSSALYPKVTDDFLEFREKYGPVDALDT KMFFVGPKMAQEVEVRFSSCGATFDVAMRFLHECPWERLQQLREQIPNVPFQMLLRGANAVGYTNYPDNVVYKFCDLAVK HGMDIFRIFDSLNYFPNIKVGMEAVGNAGGVIEAAISYTGDVSDPMASKYTLQYYEDLATELVKAGTHILGIKDMAGVLK PRAAKMLIGALRDRFPDIPIHVHTHDTACAGVASMLACAEAGADVVDVAVDSMSGLTSQPSMGAVVAALQRTELDTGIQL SDVTNYSAYWEQTRNLYAPFECCKTLKSGNSDVYINEIPGGQYTNLQFQAFSLGLADQFEEVKKMYAEANKLLGDVPKVT PSSKVVGDMAQFMVQNKLNAKMVEERVEELSFPVSVVEYFQGYLGQPPGGFPEPLRTKILKGKERIEGRAGESLPPIDFE GLKESLEERHGNIIREVDVMSSALYPKVTDDFLEFREKYGPVDALDTKMFFVGPKMAQEVEVTIEKGKTLSIKALAVGDL SKAGKREVFFELNGQTRSVSITDEAASKELHFHPKALKGVRGSVGAPMPGTIVDIKVKSGDKVEKGQPLLVLSAMKMEML VTAPCAGTIKTIHVEKSMKMEGDDLLVDIECE |
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