Gene
| Gene Model ID | pfu_aug2.0_139.1_30275 |
|---|---|
| Locus | scaffold139.1 : 220298 ... 239387 : - |
| To GenomeBrowser | scaffold139.1:220298..239387 |
| Genes list of scaffold | scaffold139.1 |
| Synonym | pfu_aug1.0_2253.1_51589 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_139.1_30275.t1 | 2 | 1 | PHD | 863 | 918 | 1.3e-15 | 56.7 | 3.2e-10 | 1.2e-06 | 28.1 |
| pfu_aug2.0_139.1_30275.t1 | 2 | 2 | PHD | 918 | 961 | 1.3e-15 | 56.7 | 5.9e-12 | 2.2e-08 | 33.6 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_139.1_30275.t1 | gi|676478944|ref|XP_009061586.1| | hypothetical protein LOTGIDRAFT_127265, partial [Lottia gigantea] | 0.0 |
| pfu_aug2.0_139.1_30275.t1 | gi|632933730|ref|XP_007885483.1| | PREDICTED: PHD finger protein 10 [Callorhinchus milii] | 0.0 |
| pfu_aug2.0_139.1_30275.t1 | gi|488562053|ref|XP_004470750.1| | PREDICTED: PHD finger protein 10 isoform X3 [Dasypus novemcinctus] | 0.0 |
| pfu_aug2.0_139.1_30275.t1 | gi|700364141|ref|XP_009926694.1| | PREDICTED: PHD finger protein 10 isoform X6 [Haliaeetus albicilla] | 0.0 |
| pfu_aug2.0_139.1_30275.t1 | gi|611999389|ref|XP_007484984.1| | PREDICTED: PHD finger protein 10 isoform X1 [Monodelphis domestica] | 0.0 |
Transcript
| Transcript ID | pfu_aug2.0_139.1_30275.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_139.1_30275.t1 atggattccgaagaagccggagaaaagcaaaatcgaaacaaagacaatgaaagtgcagtgatgagtaatactgaaagcta caaggttgacagtagaattaatcatcatcacattggaaaaacaggtcatgatgcaacagtagctaaagaaaacctattat ctgttcttggaccaaacgcagaggttaccgaatcagaaaaaatcacaatagaaaacattccaacgcctgattcacagtca aagttaccatctgtagaaaatgatacatgtgctcattcaaatgaaatcacccaagacactgcatgtgaagcaaattcaca aagcaagaatgaagaaaaaatcacatcatctggttcagaatttaaagtccctctatcaattgactcaccgaaaaatgagc ttggcagtgacaagcctttacttagcttatctttacttaaagaatacagcgacacattagatacagaagatgaagatggt agcattaatatggattcaaagtgcaatgaggaattatcgaatgataagaaccatagtctgtctgatagacaagaaaatat cagtgaacatattgaaaagagctctaatgaaaatctacaaacgaacttaacaaaggtgcctgaaaaacaaaaaaatataa gtgaacgcagtgaagcggactctgatgaatctctacaaacgggtgtattaatggtgcccgaacaacaagaaaagattgtt gaaaacagtaaaaaagattcttatgaaaattcacagagaaatgaaacaaaggtgcctcctgaaaaacaaaacagtattgg tgcacatgatgaagtgggcactgaagaaaatctgcagacagactcaggggaaaacaataaggaagtctctaatgaaaatc tactaacaaaggtaaccttggtgactgaaaaacaagaaattagcatgattaacggtgaacatagaaaagaggaatctggt gaaaaacaacagacgaaaatttcaaatgtgactgaaaatcaagaaaatattagtgaacacattaatcaagactctgataa cagtgtgcagctagacttaatcaaggtggcggaaaaagaagaaaataatagagaacttggtaaagaagatgctaatcaaa gtctccagtcaaatttaacaatggtgcctgttgatcaaacaagtagcaccagtgaacaagttggaccagaaaacgcagaa aaaatggacactatggaacagggtgaacatggagaattaagtcaatgctctcttgatacttcagagatgaatagtattgt aaagatggacacaagtagtgaagatctgaacgaggaaaagaaagaaaatcctccctatgaacgctcagaatctgaaggct ttgatactcaaggaccgagtcgaacagaggaaaagtctgatgcaaacgacagcgaatcagttgccagttcatcaaagtct gagaaatcgtccaacgtggatacttcgcatgatacaaaatgtgagaaagtctccgtaaatggtactattgaggcaatgga ggtagacagcacctcctcctcgtacccagagtccgagatgtctgaggtggctggacctcaaacaccagcctctcttaata gtgctggtgacagtatgtccgcgcctgcctatgagaccatgggaccaccaacaccggcgtccagtgtagcagagtctgtc tctgtaggacctactccatccaagagatgtaggactggaataaataccaatgaggcacctgtaacagccagtaagctgtt cgagtatcattggccacaggaggaggcaggtgaatactacatgctacaggaacaaatctcagaatttcttcatgttaagt cattcaaaagaaagtacccagatttgatgagacgacaagtggacatcaaagagcgagtttttcttcttgagaaaggagcg gtgtcagagacccaggctgatctaggactaactgcagtaagaagtgatgaagtatatgaccttatgatgaaggactatcc agctaaatatcaggaatatctacatgtcgtccatgagagacagaagcagaaaataagtgaaaagcacaaagagtatggag tccctaagctagaaaaaggaaaaatgactcagtatatcaaaaaagctatgaaatcagcatcagaatggaactcaaatttt gtacgggagaggaaagaagaaagacgggcgtatctggaccttcagacatttatcattcatcatccgagggggaagttcaa aaagctaccacccgaggcaacaaaagtcggggcatatccagtggcgcttataccaggacagttccaagatcattataaca agtattctccggcagagttgaagtactttcctttgaacactgccctgttcaaccctccaaagaaaatggacactaccctg gccaatcccaaagaggtagttgaaggggaaacagcctctgaagaagacactaatgcgacagggtcagaatcagacagtga tgagagtagtagtggatcagatgacagcagccagaaagacgagggagaccagaaaaccgagggaacaggagaaactaagg aagccgccccctctagtgaggaactttgtagaatatgtgagttggggaaatcaccggacattaaaggacaagatgacctg gtgtgctgctcagagtgcaagaaagttggtcacccttcttgtctggacctgactggagaaatggtgaaagtagtaaaaac atatccatggcagtgtatggactgtaaaacatgtgtagagtgtatggatccttatgatgaggacaagatgatgttttgtg acctgtgtgacagaggttatcacacgttctgtgtggggcttaagaacattcctaatggacgatggaaatgtcggagctgt aagggaccagagacaccaaaaacaccaaagtcagctaaatctacaagaggccgaggaaggggtagagggcgtggcagagg aggcggggccagtgaaccaggcacgcctactggacgaccacaggccacacctactcccccaccagctccatcaacctccg tcccctctcctgcaccaacaagtactgagtaa |
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Protein
| Protein ID | pfu_aug2.0_139.1_30275.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_139.1_30275.t1 MDSEEAGEKQNRNKDNESAVMSNTESYKVDSRINHHHIGKTGHDATVAKENLLSVLGPNAEVTESEKITIENIPTPDSQS KLPSVENDTCAHSNEITQDTACEANSQSKNEEKITSSGSEFKVPLSIDSPKNELGSDKPLLSLSLLKEYSDTLDTEDEDG SINMDSKCNEELSNDKNHSLSDRQENISEHIEKSSNENLQTNLTKVPEKQKNISERSEADSDESLQTGVLMVPEQQEKIV ENSKKDSYENSQRNETKVPPEKQNSIGAHDEVGTEENLQTDSGENNKEVSNENLLTKVTLVTEKQEISMINGEHRKEESG EKQQTKISNVTENQENISEHINQDSDNSVQLDLIKVAEKEENNRELGKEDANQSLQSNLTMVPVDQTSSTSEQVGPENAE KMDTMEQGEHGELSQCSLDTSEMNSIVKMDTSSEDLNEEKKENPPYERSESEGFDTQGPSRTEEKSDANDSESVASSSKS EKSSNVDTSHDTKCEKVSVNGTIEAMEVDSTSSSYPESEMSEVAGPQTPASLNSAGDSMSAPAYETMGPPTPASSVAESV SVGPTPSKRCRTGINTNEAPVTASKLFEYHWPQEEAGEYYMLQEQISEFLHVKSFKRKYPDLMRRQVDIKERVFLLEKGA VSETQADLGLTAVRSDEVYDLMMKDYPAKYQEYLHVVHERQKQKISEKHKEYGVPKLEKGKMTQYIKKAMKSASEWNSNF VRERKEERRAYLDLQTFIIHHPRGKFKKLPPEATKVGAYPVALIPGQFQDHYNKYSPAELKYFPLNTALFNPPKKMDTTL ANPKEVVEGETASEEDTNATGSESDSDESSSGSDDSSQKDEGDQKTEGTGETKEAAPSSEELCRICELGKSPDIKGQDDL VCCSECKKVGHPSCLDLTGEMVKVVKTYPWQCMDCKTCVECMDPYDEDKMMFCDLCDRGYHTFCVGLKNIPNGRWKCRSC KGPETPKTPKSAKSTRGRGRGRGRGRGGGASEPGTPTGRPQATPTPPPAPSTSVPSPAPTSTE |
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