Gene
| Gene Model ID | pfu_aug2.0_139.1_30276 |
|---|---|
| Locus | scaffold139.1 : 241298 ... 245322 : + |
| To GenomeBrowser | scaffold139.1:241298..245322 |
| Genes list of scaffold | scaffold139.1 |
| Synonym | pfu_aug1.0_2253.1_51590 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_139.1_30276.t1 | 1 | 1 | bZIP_2 | 264 | 316 | 2.0e-12 | 46.7 | 4.3e-16 | 3.2e-12 | 46.0 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_139.1_30276.t1 | gi|524869337|ref|XP_005091463.1| | PREDICTED: cell death specification protein 2-like [Aplysia californica] | 1.0e-30 |
| pfu_aug2.0_139.1_30276.t1 | gi|676478947|ref|XP_009061587.1| | hypothetical protein LOTGIDRAFT_166272 [Lottia gigantea] | 1.0e-29 |
| pfu_aug2.0_139.1_30276.t1 | gi|556997122|ref|XP_006002026.1| | PREDICTED: transcription factor VBP-like isoform X3 [Latimeria chalumnae] | 1.0e-10 |
| pfu_aug2.0_139.1_30276.t1 | gi|658906731|ref|XP_008436095.1| | PREDICTED: thyrotroph embryonic factor isoform X2 [Poecilia reticulata] | 2.0e-10 |
| pfu_aug2.0_139.1_30276.t1 | gi|556997116|ref|XP_006002024.1| | PREDICTED: transcription factor VBP-like isoform X1 [Latimeria chalumnae] | 2.0e-10 |
Transcript
| Transcript ID | pfu_aug2.0_139.1_30276.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_139.1_30276.t1 atgacggctcagccattcgatgagtctaatgccagcatatcaaagctgatggcgggggccattatgatagacggaaactg tagcgacctgccgtggacggacagtttcccggtctcacattctccactagttaaattggagagaaatcatgaaccattta caaataacctagactgctggcagttaccaccaaatgattacgcacaccccgctttccagcatcgcacgcaaaataatgga ttaaattccgtaacaaatggcagcatgagtggtcaagaaacaaaccttacttctaactctttcttaccaaatttcggaaa caatcaattcaaaccaccgcaagatcagtgccgacagaaatatggcaattattccaacgaaaaatatcccgattttcatg tgaaaccggaaatggatgacaataaatggccacattgtgcaatgactcctggaagggacatgtataacttacgacccacg gtcaataacccatcatcatctaaggatgaagcttattcgccgccagcgtctttcaacggaagttcacttggccaaaaaag cagtccgaccaacggagagaagaaactcgactttcccgaatcggacagcgattccaaaacaagtggcaccgatagccaag gtcatgggcgcgaatggccgtccaacagcaacacgcccccacttgatatcaatgttgatgatatgatcaataacggcgta accgtggccggatataaaccgcgaaaacttatctgcaagcggaaaaagtcgtcaatcccgtcggagcagaaagatcccgg atattgggaaaagcggaagaagaacaacgattcagcaaggcgctcacgagaggcaaagaaagaaaaggaaagaaatttct ataagcgtgctcttgaactggagtatgaaaatcattatctcaaagaaagggtcgcttttctggagagaaagctagaggca gtcatgcaacagaatcccggtttccatggaaacgactcgacgccgccaatgtag |
|
Protein
| Protein ID | pfu_aug2.0_139.1_30276.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_139.1_30276.t1 MTAQPFDESNASISKLMAGAIMIDGNCSDLPWTDSFPVSHSPLVKLERNHEPFTNNLDCWQLPPNDYAHPAFQHRTQNNG LNSVTNGSMSGQETNLTSNSFLPNFGNNQFKPPQDQCRQKYGNYSNEKYPDFHVKPEMDDNKWPHCAMTPGRDMYNLRPT VNNPSSSKDEAYSPPASFNGSSLGQKSSPTNGEKKLDFPESDSDSKTSGTDSQGHGREWPSNSNTPPLDINVDDMINNGV TVAGYKPRKLICKRKKSSIPSEQKDPGYWEKRKKNNDSARRSREAKKEKERNFYKRALELEYENHYLKERVAFLERKLEA VMQQNPGFHGNDSTPPM |
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