Gene
| Gene Model ID | pfu_aug2.0_139.1_30281 |
|---|---|
| Locus | scaffold139.1 : 323111 ... 332147 : - |
| To GenomeBrowser | scaffold139.1:323111..332147 |
| Genes list of scaffold | scaffold139.1 |
| Synonym | pfu_aug1.0_20084.1_04066 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_139.1_30281.t1 | 4 | 1 | EF-hand_7 | 35 | 70 | 1.7e-10 | 40.8 | 0.055 | 160.0 | 2.4 |
| pfu_aug2.0_139.1_30281.t1 | 4 | 2 | EF-hand_7 | 117 | 181 | 1.7e-10 | 40.8 | 0.0021 | 6.2 | 7.0 |
| pfu_aug2.0_139.1_30281.t1 | 4 | 3 | EF-hand_7 | 224 | 301 | 1.7e-10 | 40.8 | 8.0e-10 | 2.4e-06 | 27.5 |
| pfu_aug2.0_139.1_30281.t1 | 4 | 4 | EF-hand_7 | 285 | 323 | 1.7e-10 | 40.8 | 6.6e-05 | 0.2 | 11.8 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_139.1_30281.t1 | gi|524915679|ref|XP_005112632.1| | PREDICTED: serine/threonine-protein phosphatase 2A regulatory subunit B'' subunit gamma-like [Aplysia californica] | 0.0 |
| pfu_aug2.0_139.1_30281.t1 | gi|585712120|ref|XP_006824861.1| | PREDICTED: serine/threonine-protein phosphatase 2A regulatory subunit B'' subunit gamma-like [Saccoglossus kowalevskii] | 0.0 |
| pfu_aug2.0_139.1_30281.t1 | gi|556955590|ref|XP_005989237.1| | PREDICTED: serine/threonine-protein phosphatase 2A regulatory subunit B'' subunit gamma isoform X2 [Latimeria chalumnae] | 0.0 |
| pfu_aug2.0_139.1_30281.t1 | gi|556955587|ref|XP_005989236.1| | PREDICTED: serine/threonine-protein phosphatase 2A regulatory subunit B'' subunit gamma isoform X1 [Latimeria chalumnae] | 0.0 |
| pfu_aug2.0_139.1_30281.t1 | gi|701373714|ref|XP_009992160.1| | PREDICTED: serine/threonine-protein phosphatase 2A regulatory subunit B'' subunit gamma [Chaetura pelagica] | 0.0 |
Transcript
| Transcript ID | pfu_aug2.0_139.1_30281.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_139.1_30281.t1 atgctaccatcagaagaagagccccttttgcttaaactcagggaggaatccagagctgtgttcttacaaagaagaagcag agaactgttagacaatgatgagttacagcgtctatggttcttgctagatcagcatcacactcctcccattgtaggagagg atcagatgataaactacgaggacttcctaaaggtcggagcagaagccggaaaaaagtgcaagcaatttttcactgccatg gtattttgtaaactgtcgcagacagatccatacggtagaatatccatcatgcagttctttaactatgtgatgcgtaaagt ttggcttcaccagaccaggatcggactttctctctatgatgttgctggacaaggttacctgaaagaatcggatttagaaa attacatattagaattaatacctacactgccacagctaaatggcctagagaagtcgttttactctttctatgtttgcaca gctgtccgtaagttcttcttcttcctcgatccaatgaggactggaagaataaagatacaagatatcttagcatgcagctt cttagatgatctcctggagttaagagatgaagaactttccaaagagatgcaggagtcaaattggttttcagcaccgtcag cattaagggtgtatggtcagtacctaaatctggataaagatcataacggaatgctcagtaaagaggagctagccagatat ggtacagggacactaacagaggtatttctggacagagtttttcaggaatgtttaacatatgaaggagaaatggactacaa gacatacttagatttcgtattagctttagaaaatcgccgcgagccacaatcattacgttacttattccgcatattagacg tacagcataagggatacctcaatgtgttctctcttaacttcttcttcagggcaatacaagagcagatgaaattacatggt caggaacccgtctcctttcatgacgtcaaagatgagatatttgatatggttaaacctaaagatcccctacacctgacact acaagatctcattcagagtggtaaaggtgacacagttgtcagtattctgatagacttgaatgatttctggacgtatgaaa atcgtgaatatctagtcccagatacggcagaggaatccgaaatttga |
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Protein
| Protein ID | pfu_aug2.0_139.1_30281.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_139.1_30281.t1 MLPSEEEPLLLKLREESRAVFLQRRSRELLDNDELQRLWFLLDQHHTPPIVGEDQMINYEDFLKVGAEAGKKCKQFFTAM VFCKLSQTDPYGRISIMQFFNYVMRKVWLHQTRIGLSLYDVAGQGYLKESDLENYILELIPTLPQLNGLEKSFYSFYVCT AVRKFFFFLDPMRTGRIKIQDILACSFLDDLLELRDEELSKEMQESNWFSAPSALRVYGQYLNLDKDHNGMLSKEELARY GTGTLTEVFLDRVFQECLTYEGEMDYKTYLDFVLALENRREPQSLRYLFRILDVQHKGYLNVFSLNFFFRAIQEQMKLHG QEPVSFHDVKDEIFDMVKPKDPLHLTLQDLIQSGKGDTVVSILIDLNDFWTYENREYLVPDTAEESEI |
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