Gene
| Gene Model ID | pfu_aug2.0_139.1_30284 |
|---|---|
| Locus | scaffold139.1 : 402698 ... 413514 : - |
| To GenomeBrowser | scaffold139.1:402698..413514 |
| Genes list of scaffold | scaffold139.1 |
| Synonym | pfu_aug1.0_666.1_36637 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_139.1_30284.t1 | 2 | 1 | MAM | 25 | 160 | 2.2e-13 | 50.3 | 6.9e-17 | 2.6e-13 | 50.0 |
| pfu_aug2.0_139.1_30284.t1 | 2 | 2 | MAM | 184 | 208 | 2.2e-13 | 50.3 | 0.95 | 3500.0 | -2.4 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_139.1_30284.t1 | gi|556985462|ref|XP_005998456.1| | PREDICTED: neuropilin-2 isoform X2 [Latimeria chalumnae] | 9.0e-09 |
| pfu_aug2.0_139.1_30284.t1 | gi|196011461|ref|XP_002115594.1| | hypothetical protein TRIADDRAFT_59473 [Trichoplax adhaerens] | 1.0e-08 |
| pfu_aug2.0_139.1_30284.t1 | gi|585690519|ref|XP_006821082.1| | PREDICTED: MAM and LDL-receptor class A domain-containing protein C10orf112-like [Saccoglossus kowalevskii] | 5.0e-08 |
Transcript
| Transcript ID | pfu_aug2.0_139.1_30284.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_139.1_30284.t1 atggaaggaagtgaaaaatgttacctatgtgtattgggacttttacttgtgtatactgaaggttccaatgactgctattt tgaacaagatttttgtcaatggagaaatgaaggatggaaaagaacttcctacactagcccatcacaacttacaggccccc aggatttcattaatggatcttacatatatttggacacatttgacgacaacgtgttcgaagccactcttacctcacctaca atcgacaaagagcgccaatgctttgtgttcagatatcatatgaaaggaaccgatgttggtaatttgactgtcactgtaag cagtgtcgctaccataactatatttgatcatcagtcggacagttggcgctgtggaataattttcatcccaaacagtggag tatctattcagcttacaggttacaggcgtggtctattggaatatggaatcatctcccttgatgcccttacattcattgac agcgacgagagtgcatgcacgacggatgtctacatgtctactacagagtgtgaaacactaaccccgatatcaacgtcccc acctacaactcccaccaaccagccacaggatacaacgtcatctaatgcttggccagactacatgacgtatgctatagcca taccaggtggtatcctcgtcatcagtattataagtatcatagttggagtatgttacaaaaggagtaagaataacacgtac ctgtcctcgacggaaatgccatccttgaacgtttatgattatatagacgagaagatgatatctaacgatggagcagacga ctatctgacacctacaaacaatgacgagggatacaccgtacttcccgccataactaagaagctagagaactatggcagca actatgtggaaccgtgtgacttaaatctttccaacagaccgggaaaaaagatatcgatcagcgagcagggtgacgtacaa tacactgacgtcagaaatcacggacaacggagtagggtcccctctaaagtgtacaccattacacaagactatcttgacat gacgaagtga |
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Protein
| Protein ID | pfu_aug2.0_139.1_30284.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_139.1_30284.t1 MEGSEKCYLCVLGLLLVYTEGSNDCYFEQDFCQWRNEGWKRTSYTSPSQLTGPQDFINGSYIYLDTFDDNVFEATLTSPT IDKERQCFVFRYHMKGTDVGNLTVTVSSVATITIFDHQSDSWRCGIIFIPNSGVSIQLTGYRRGLLEYGIISLDALTFID SDESACTTDVYMSTTECETLTPISTSPPTTPTNQPQDTTSSNAWPDYMTYAIAIPGGILVISIISIIVGVCYKRSKNNTY LSSTEMPSLNVYDYIDEKMISNDGADDYLTPTNNDEGYTVLPAITKKLENYGSNYVEPCDLNLSNRPGKKISISEQGDVQ YTDVRNHGQRSRVPSKVYTITQDYLDMTK |
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