Gene
| Gene Model ID | pfu_aug2.0_139.1_30285 |
|---|---|
| Locus | scaffold139.1 : 414744 ... 440814 : - |
| To GenomeBrowser | scaffold139.1:414744..440814 |
| Genes list of scaffold | scaffold139.1 |
| Synonym | pfu_aug1.0_666.1_36638 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_139.1_30285.t1 | 3 | 1 | NACHT | 267 | 290 | 3.0e-11 | 43.2 | 3.1 | 5800.0 | -3.3 |
| pfu_aug2.0_139.1_30285.t1 | 3 | 2 | NACHT | 334 | 355 | 3.0e-11 | 43.2 | 4.9 | 9000.0 | -3.9 |
| pfu_aug2.0_139.1_30285.t1 | 1 | 1 | AAA_16 | 475 | 613 | 9.8e-11 | 41.9 | 2.9e-13 | 5.4e-10 | 39.5 |
| pfu_aug2.0_139.1_30285.t1 | 1 | 1 | Arch_ATPase | 475 | 606 | 3.7e-06 | 26.8 | 5.3e-09 | 9.9e-06 | 25.4 |
| pfu_aug2.0_139.1_30285.t1 | 1 | 1 | AAA_22 | 495 | 609 | 5.8e-06 | 26.4 | 9.2e-09 | 1.7e-05 | 24.9 |
| pfu_aug2.0_139.1_30285.t1 | 3 | 3 | NACHT | 496 | 665 | 3.0e-11 | 43.2 | 6.6e-14 | 1.2e-10 | 41.2 |
Transcript
| Transcript ID | pfu_aug2.0_139.1_30285.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_139.1_30285.t1 atgggatcgtcgtcatcaactcagaataaagccaagtcagccccaccttctggaagacagcaggagaaggtagttgctaa tgggaacagtaaccatgtcaaccagaaacctcctgaaactcaaggtcaaggacaaaagccacagcaaacacaaaacatcc agaatgacaaacctgctcagaatggtcaaagttcgacaacaaagggtcaaggtgctcagagacccgcgacacgacaaaag tcggcagggcgtcctaagaccgggcgtgtcaaggccatgggcatggagatggcacgcgagaagacaatgggattgaaaag ggagaaaacattgggtctgaaacgggagaaaacagtcgggattcagcgggagaagacgacgtttgacaggagccggagga ggctgacgcagtcagtgatccgtaacacagatttctctaaggacgcctttaaggtggacagagtgttcgtgggggatatg accattgaatgtccgtctacagctaaaatcgtccgcatcttcacaagcagcacgtttactgatacgatgcatgaaaggaa caaatggatgactgacgcatacccccgtataaagcggttctgccaggagaaggggtatgatttccaggtggtggatatga gatggggagtaagggacgaggccaatgacgaacacacagccacggaactatgtctgaaggaactcaaattatgtcaaaaa ctatcaacaggaccaaacttcgtgtctttgctttcccacaaatacggataccggtcgttacagagagttatagatgccga ggagtttgagactttactatctgcaatagaggatgatcattcaaaagaaatcttgaacaaatggtttcagagagacaaca acagtgtgcctccaatatatgtcctttcccctatcagtaagttgatcccagatttcctgtctgcagacaaggagaagaag aaagcagccaagcagcagtggtgggacgagggggaccttatgcaggaggcgctagaacaggctgccctcaaagcactggg cgaagagaacgccagaaattatgtcatctcagagaatattgaatcaagctggcagctttcaagatatattgagtgtcttg gagatgacgagaaatggcagaaaccaagacgactgatggaggaactgagagagaaaagaatgtctaagattttaccatct gaaaatattctacattatagcgtcaactggacggagaaaggtatcgatccagacttcgccgaacacaaagaatacttagc aaagatgacagagggtttcattgaccttatgtgtagtaaaatcgactctgccatcacagaacattccaaatcccataagg tcgatcctctgtatgaagagtgtatcgaacacacccttttctgcaagacaaaatgtgagaatttctatggacgcgaggat actcttcaaaaaataaaggagtacatatatggtgattcaaacaacactctagttgtacatggtttatctggaagtggtaa aacatcgattgtagctaaatgtgctcaacttatcccaacatggctgaaatctggagcagcaattatgatcaggtttattg gtacaactccgaacagctctaacatagcatcaatgcttgccagtctcacgaaacagataaagctggtttatgcacgtgac actaaagttcctgaggagctgaatgagcttgtgcaagaatttcaaaggtgcttggaatatgcaagtcaaagtcatccatt gataatcatattagactcgctagatcaaatagattcttcccataatgcacggcaactgacatggctgccgactcgacttc cggcatatgtcaaatttattgtgtccactctagaggaggaggaataccagtgcttccagaaattgcagacatttgttagt aacaaaaacatgatagctgtgcccaaattacccgctgatgacgtcagtggtattgttaacaaatggctgagcaatcagag acgatgcctgactgatgtgcagatgcagatattgctcaaatcgtttgatagctgcccactccctctttacctgaaactct ctttcgacgaagcgtgtaggtggcagtcttacgctagtgcttccgatacagttctacagaagacaatcagagacagtatc aatagtttatacaaacgtttggaagtgtcacatggagaaaaattggtatctagggcgttaggatatctcacggcggccag gaatggtttgtcagagtcagagttggaggacatactgtcctgtgatgaggatgtactcaatgacgtgtacatgtactgga cacctcctctccgaaggctccctccattactgctcgtccgtctgaggactgacctacagcagtatctagtggagcgcgag gcagatggtgtaagagtaatgaactggtatcaccgtcagttcatagaggcagccagagcacgatactgtacaaaagacaa ggcgtcattcctacacagtcaacttgctgactttttctctggaaaatgggcagatggtagcaaaaaaccttacactgaca aagctggtaaatcagacagtagcgatcgtcactgtgtttcccagccactccagttcggtgatacttacaacataaggaag atgaacagtctaccttttcatagactatacgctggagatctcacaaagctcaaggaggaatgtctgtgcaacttcgaatt cttacaaacaaagcttgctgcaatatcaatcagatcagccgagggaatcgatacgattggtaaacgagagatggttgatg actatgaccatgcaagacgaatatttccgaaagaccaacaactgaacttgataggggatgctctacagctgtcagaagat gatatgatttatgacccttttatgtttcctggtcaaatgctagacagattggccggagaaaaggatgtagcagactttct gaaacagtgtgagagctgtaccaacctttacttacggccaaaccaagaagtgttggtcaaacctggtggtcagcttctag ttgcaatggctggacataggggtccagttagatcactggatttaaagaaaaatggcaaagtagccgttacgtgttgtgaa gatggagatgacgaaatacgcacgtgggatgttcaaacgtgtcgcatgctgcgttgctatgaagaactggggacggaacc tcattttgtgtctttcataaacaatgatgaacatatcctaattcagtttgccggtgcaataaaagttataacagaagagg gtagtataatgtactctatagagacgcccacccctatgtaccaattatgtgtagcagggaagggaaaatctgtaatagga atattcactgagagaacggtggaattgtacgacgcaacaaatggaagaaaaattgacagttcaaaattcacttctgatgc aataacgtttggtgctgaaggaattaatgcgggctcggatcagttcatggttgtcacagacaccactcagcaacatctgg ctatattcagtttaaaatccagatcatttgttggcgtgggacaagtgatgacgtcagacgcagacggcgagtacatgagt atcgatgcattgacaatatcggccaatgagaaacaagtttacttcactgacagttggaccaatgatatcagaactctaga tattgccaaattcaaagaagtctccgtaaagaaaggttcaacggatgattatactctaagttatcacgtgtcatatgacg ggaagaagctgtatttctcctcacacaaggagtttgtcattatggatcttagtagcggcaagaaggagtacctgatttcc cacccttgtaacatcacggatgtacggactgccgaccttaaaaaagtggtgactataacagaggacacgtgtgtcagggt atgggacgttactaaacctgtgaaggaaggagatatcctaaagtactgtcttggatacaatatatggaatatgaagacgt tgccgaatccacggtatgtggccatactgtttaagaggtccgagaagcagaacaatccggacttttcttttggagtatat gacatggcgaaaaacagaatcgtccgcgaagcacaactaaaagagagtcccagtgtgttgattgtccttgatgataaata cgccgtactgaacatggggagtcgacgtgtgaagattgtagatatggatactatgaccgtgcatagctcttttgagggta aaataaacaatcaagaggactcgggtcacgtggttaaagacggaacaggaatcgttatcaggtcaaggaatcaacataac ctcaaactgtacgatattgaatcgggaaagacgaaaacaatatttagaggggaatcctctttgtgcaaaatatcaaaatt tgtgtgtagccaatccggcgatctcatcctagcgaaggtgagtgacggaccaatcatcgtctacgacataatatcaaata caaaaactgtaattcataccaaaaatctcggagttaaggatttaggggacaaaatgtgtgtatcgtcaagtgatcacaga gttgttgttagtggcgaaaaggatgtcgtattctccggagagaagaacagagaacacgttgctttcatttgggattccaa gaaaagatgtgtaattgcggaattgttagacaaagaatacttcttcaagtatatgacgaaggagaaccgtaaaggattgt cgatctcggtcgatgatgtcatgtgtgtgaatggaactgatattgtcagcgcacatgatgactatattatgagggtctgg gatcttatgtcaggtgatctactgcaccgtttgatgggtcactcctctaacattgagatgtattgtatagaagaagggaa cttctttgtgacttacggatgttgggaggaggagaacgcactacgtctgtgggatgccacttccttcacttgtgtggcat ccttcaaactcgatcatcctattgtcagagccagcatttgttctgacggccgcagtttcgtgacgtacactgtgaatcct gccagggtagtacattggaaacttcacggtaatgaaccgatggtggatctatttttagagaaggaaacctttgaaggaga gctgacggtcgaccttgaccttcaggacgaagctgactatgacgaggacccaggagacatagattcagactttggtgata ccgataaagaagatgaagatgattatgatgaagaagaagatgatgatgacgatgattacacgtaa |
|
Protein
| Protein ID | pfu_aug2.0_139.1_30285.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_139.1_30285.t1 MGSSSSTQNKAKSAPPSGRQQEKVVANGNSNHVNQKPPETQGQGQKPQQTQNIQNDKPAQNGQSSTTKGQGAQRPATRQK SAGRPKTGRVKAMGMEMAREKTMGLKREKTLGLKREKTVGIQREKTTFDRSRRRLTQSVIRNTDFSKDAFKVDRVFVGDM TIECPSTAKIVRIFTSSTFTDTMHERNKWMTDAYPRIKRFCQEKGYDFQVVDMRWGVRDEANDEHTATELCLKELKLCQK LSTGPNFVSLLSHKYGYRSLQRVIDAEEFETLLSAIEDDHSKEILNKWFQRDNNSVPPIYVLSPISKLIPDFLSADKEKK KAAKQQWWDEGDLMQEALEQAALKALGEENARNYVISENIESSWQLSRYIECLGDDEKWQKPRRLMEELREKRMSKILPS ENILHYSVNWTEKGIDPDFAEHKEYLAKMTEGFIDLMCSKIDSAITEHSKSHKVDPLYEECIEHTLFCKTKCENFYGRED TLQKIKEYIYGDSNNTLVVHGLSGSGKTSIVAKCAQLIPTWLKSGAAIMIRFIGTTPNSSNIASMLASLTKQIKLVYARD TKVPEELNELVQEFQRCLEYASQSHPLIIILDSLDQIDSSHNARQLTWLPTRLPAYVKFIVSTLEEEEYQCFQKLQTFVS NKNMIAVPKLPADDVSGIVNKWLSNQRRCLTDVQMQILLKSFDSCPLPLYLKLSFDEACRWQSYASASDTVLQKTIRDSI NSLYKRLEVSHGEKLVSRALGYLTAARNGLSESELEDILSCDEDVLNDVYMYWTPPLRRLPPLLLVRLRTDLQQYLVERE ADGVRVMNWYHRQFIEAARARYCTKDKASFLHSQLADFFSGKWADGSKKPYTDKAGKSDSSDRHCVSQPLQFGDTYNIRK MNSLPFHRLYAGDLTKLKEECLCNFEFLQTKLAAISIRSAEGIDTIGKREMVDDYDHARRIFPKDQQLNLIGDALQLSED DMIYDPFMFPGQMLDRLAGEKDVADFLKQCESCTNLYLRPNQEVLVKPGGQLLVAMAGHRGPVRSLDLKKNGKVAVTCCE DGDDEIRTWDVQTCRMLRCYEELGTEPHFVSFINNDEHILIQFAGAIKVITEEGSIMYSIETPTPMYQLCVAGKGKSVIG IFTERTVELYDATNGRKIDSSKFTSDAITFGAEGINAGSDQFMVVTDTTQQHLAIFSLKSRSFVGVGQVMTSDADGEYMS IDALTISANEKQVYFTDSWTNDIRTLDIAKFKEVSVKKGSTDDYTLSYHVSYDGKKLYFSSHKEFVIMDLSSGKKEYLIS HPCNITDVRTADLKKVVTITEDTCVRVWDVTKPVKEGDILKYCLGYNIWNMKTLPNPRYVAILFKRSEKQNNPDFSFGVY DMAKNRIVREAQLKESPSVLIVLDDKYAVLNMGSRRVKIVDMDTMTVHSSFEGKINNQEDSGHVVKDGTGIVIRSRNQHN LKLYDIESGKTKTIFRGESSLCKISKFVCSQSGDLILAKVSDGPIIVYDIISNTKTVIHTKNLGVKDLGDKMCVSSSDHR VVVSGEKDVVFSGEKNREHVAFIWDSKKRCVIAELLDKEYFFKYMTKENRKGLSISVDDVMCVNGTDIVSAHDDYIMRVW DLMSGDLLHRLMGHSSNIEMYCIEEGNFFVTYGCWEEENALRLWDATSFTCVASFKLDHPIVRASICSDGRSFVTYTVNP ARVVHWKLHGNEPMVDLFLEKETFEGELTVDLDLQDEADYDEDPGDIDSDFGDTDKEDEDDYDEEEDDDDDDYT |
|